RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 IGF2P01344 180 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 CTSSP25774 331 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 CSNK1EP49674 416 aaKnown RBP13.33□□□□□ -0.28
SCN3B-201ENST00000299333 TMEM33P57088 247 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 DUSP2Q05923 314 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 ZNF880Q6PDB4 577 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 LINC00518Q8N0U6 118 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 RBM38Q9H0Z9 239 aaKnown RBP13.33□□□□□ -0.28
SCN3B-201ENST00000299333 AAMDCQ9H7C9 122 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 KIR3DX1Q9H7L2 352 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 ZNF785A8K8V0 405 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 PHLPP1O60346 1717 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 OR3A1P47881 315 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 SAMD13Q5VXD3 122 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 C9orf62Q8N4C0 152 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 OR10A7Q8NGE5 316 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 OR10G4Q8NGN3 311 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 OR10G9Q8NGN4 311 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 OR10G7Q8NGN6 311 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 FAM174AQ8TBP5 190 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 CLDN23Q96B33 292 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 UPK1AO00322 258 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 CDS2O95674 445 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 CA3P07451 260 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 NPY1RP25929 384 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 GAMTQ14353 236 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 FAM109BQ6ICB4 259 aaPredicted RBP13.33□□□□□ -0.28
SCN3B-201ENST00000299333 EIF4E3Q8N5X7 224 aaKnown RBP13.33□□□□□ -0.28
SCN3B-201ENST00000299333 PLPPR2Q96GM1 343 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 ADAT1Q9BUB4 502 aaKnown RBP13.33□□□□□ -0.28
SCN3B-201ENST00000299333 LRP12Q9Y561 859 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 CXorf65A6NEN9 183 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 ETHE1O95571 254 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 G6PCP35575 357 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 HLA-BQ31612 363 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 METRNLQ641Q3 311 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 ABI3BPQ7Z7G0 1075 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 OR2C3Q8N628 320 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 OR1L3Q8NH93 324 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 CXCL16Q9H2A7 254 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 ZMIZ1Q9ULJ6 1067 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 HSF4Q9ULV5 492 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 ADAMTS5Q9UNA0 930 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 A0A1B0GTL3 188 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 A0A1B0GX78 115 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 ISLRO14498 428 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 INHBBP09529 407 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 RNF224P0DH78 156 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 PGA3P0DJD8 388 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 CAMKMTQ7Z624 323 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 NEIL1Q96FI4 390 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-201ENST00000299333 RAB33BQ9H082 229 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 HPXP02790 462 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 CDAP32320 146 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 KLRB1Q12918 225 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 STPG2Q8N412 459 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 CHAC2Q8WUX2 184 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 EDARADDQ8WWZ3 215 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 MAP1LC3CQ9BXW4 147 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 KCNE3Q9Y6H6 103 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 KLRC4-KLRK1H3BQV0 150 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 CXCL3P19876 107 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-201ENST00000299333 SPINK9Q5DT21 86 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 ALKAL1Q6UXT8 129 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 MRGPREQ86SM8 312 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 C20orf196Q8IYI0 205 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-201ENST00000299333 DMRTA2Q96SC8 542 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 RNF2Q99496 336 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 C4AP0C0L4 1744 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 OOEPA6NGQ2 149 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 IFITM10A6NMD0 228 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 F5H697 171 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 DSCR3O14972 297 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 RBP4P02753 201 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 FKBP2P26885 142 aaKnown RBP13.32□□□□□ -0.28
SCN3B-201ENST00000299333 ARR3P36575 388 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 WFDC5Q8TCV5 224 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 RAB40CQ96S21 281 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 DOK1Q99704 481 aa13.32□□□□□ -0.28
SCN3B-201ENST00000299333 FIGNL2A6NMB9 653 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 CTAG2O75638 210 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 TSPAN13O95857 204 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 SBK3P0C264 359 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 GABRA1P14867 456 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 SRSF9Q13242 221 aaKnown RBP eCLIP13.31□□□□□ -0.28
SCN3B-201ENST00000299333 FAM219BQ5XKK7 198 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 SLC35E4Q6ICL7 350 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 OR13G1Q8NGZ3 307 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 ATOH1Q92858 354 aaPredicted RBP13.31□□□□□ -0.28
SCN3B-201ENST00000299333 OXGR1Q96P68 337 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 CACFD1Q9UGQ2 172 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 ICAM5Q9UMF0 924 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 SLC45A2Q9UMX9 530 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 C3orf85A0A1B0GTC6 90 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 NUP37Q8NFH4 326 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms