RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ETV3LQ6ZN32 361 aa16.78■□□□□ 0.28
TRA2A-201ENST00000297071 C1QL2Q7Z5L3 287 aa16.78■□□□□ 0.28
TRA2A-201ENST00000297071 LYZL4Q96KX0 146 aa16.78■□□□□ 0.28
TRA2A-201ENST00000297071 GNRHR2Q96P88 292 aa16.78■□□□□ 0.28
TRA2A-201ENST00000297071 KCNJ16Q9NPI9 418 aa16.78■□□□□ 0.28
TRA2A-201ENST00000297071 NECAP2Q9NVZ3 263 aa16.78■□□□□ 0.28
TRA2A-201ENST00000297071 HDGFL3Q9Y3E1 203 aa16.78■□□□□ 0.28
TRA2A-201ENST00000297071 NCOA6Q14686 2063 aaPredicted RBP16.78■□□□□ 0.28
TRA2A-201ENST00000297071 ARID1BQ8NFD5 2236 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-201ENST00000297071 A0A1W2PPE3 182 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 A0A1W2PPH5 198 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 A6NLC8 198 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 UMAD1C9J7I0 102 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 WRBO00258 174 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 FBP1P09467 338 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 DUSP1P28562 367 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 OTX1P32242 354 aaPredicted RBP16.77■□□□□ 0.28
TRA2A-201ENST00000297071 SMAD4Q13485 552 aaKnown RBP16.77■□□□□ 0.28
TRA2A-201ENST00000297071 FAM209BQ5JX69 171 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 C10orf128Q5T292 105 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 PLXDC2Q6UX71 529 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 LIAT1Q6ZQX7 453 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 PLXDC1Q8IUK5 500 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 POM121Q96HA1 1249 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 HIPK2Q9H2X6 1198 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 CD207Q9UJ71 328 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 TINAGQ9UJW2 476 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 MCTS1Q9ULC4 181 aaKnown RBP16.77■□□□□ 0.28
TRA2A-201ENST00000297071 VDAC3Q9Y277 283 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 SEC16AO15027 2179 aa16.77■□□□□ 0.28
TRA2A-201ENST00000297071 CHD9Q3L8U1 2897 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 K7N7A8 449 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 M0R036 132 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 RER1O15258 196 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 CHATP28329 748 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 LANCL3Q6ZV70 420 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 FOXRED2Q8IWF2 684 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 GJC3Q8NFK1 279 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 ABHD14BQ96IU4 210 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 IP6K3Q96PC2 410 aa16.77■□□□□ 0.27
TRA2A-201ENST00000297071 A0A087WWC5 75 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 PPIHO43447 177 aaKnown RBP16.76■□□□□ 0.27
TRA2A-201ENST00000297071 QDPRP09417 244 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 OR5H8P0DN80 308 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 SLC2A1P11166 492 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 PPM1FP49593 454 aaPredicted RBP16.76■□□□□ 0.27
TRA2A-201ENST00000297071 MFAP5Q13361 173 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 UBE2V2Q15819 145 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 SPSB1Q96BD6 273 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 SYT3Q9BQG1 590 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 NUDT22Q9BRQ3 303 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 EIF5A2Q9GZV4 153 aaKnown RBP16.76■□□□□ 0.27
TRA2A-201ENST00000297071 WFDC1Q9HC57 220 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 PLEKHJ1Q9NW61 149 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 CLEC1BQ9P126 229 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 MIOXQ9UGB7 285 aa16.76■□□□□ 0.27
TRA2A-201ENST00000297071 IGKV1D-8A0A087WSZ0 117 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 AQP7P3A6NL99 342 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ZNF726A6NNF4 738 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 H3BML4 177 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 CLN5O75503 358 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ZNF728P0DKX0 622 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 SERPINA2P20848 420 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 CD38P28907 300 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 CDAP32320 146 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 PIGPP57054 158 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 KRBOX4Q5JUW0 171 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 DNLZQ5SXM8 178 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ASCL4Q6XD76 172 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 LGI3Q8N145 548 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 OR5L2Q8NGL0 311 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ZNF701Q9NV72 531 aaPredicted RBP16.75■□□□□ 0.27
TRA2A-201ENST00000297071 TMED3Q9Y3Q3 217 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 DMRT1Q9Y5R6 373 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 MYO7BQ6PIF6 2116 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 TRANK1O15050 2925 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 IGHV1OR21-1A0A087WYE8 117 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ST8SIA3O43173 380 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 NME2P1O60361 137 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 FCGR2AP12318 317 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 HOXA5P20719 270 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 MSR1P21757 451 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 CD27P26842 260 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 PTGDSP41222 190 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ZNF616Q08AN1 781 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 HEPN1Q6WQI6 88 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ANKRD37Q7Z713 158 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 SMIM3Q9BZL3 60 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 ZNF160Q9HCG1 818 aa16.75■□□□□ 0.27
TRA2A-201ENST00000297071 HTR5AP47898 357 aa16.74■□□□□ 0.27
TRA2A-201ENST00000297071 SRPXP78539 464 aa16.74■□□□□ 0.27
TRA2A-201ENST00000297071 TMEM156Q8N614 296 aa16.74■□□□□ 0.27
TRA2A-201ENST00000297071 MAFIPQ8WZ33 124 aa16.74■□□□□ 0.27
TRA2A-201ENST00000297071 TMEM54Q969K7 222 aa16.74■□□□□ 0.27
TRA2A-201ENST00000297071 ZNF501Q96CX3 271 aaPredicted RBP16.74■□□□□ 0.27
TRA2A-201ENST00000297071 MARS2Q96GW9 593 aaKnown RBP16.74■□□□□ 0.27
TRA2A-201ENST00000297071 METTL9Q9H1A3 318 aa16.74■□□□□ 0.27
TRA2A-201ENST00000297071 DUSP15Q9H1R2 295 aaPredicted RBP16.74■□□□□ 0.27
TRA2A-201ENST00000297071 NELFAQ9H3P2 528 aa16.74■□□□□ 0.27
TRA2A-201ENST00000297071 C11orf1Q9H5F2 150 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms