RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 MPZP25189 248 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 TSPAN7P41732 249 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CXorf67Q86X51 503 aaPredicted RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 SUMF1Q8NBK3 374 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 OR5L1Q8NGL2 311 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 PSMF1Q92530 271 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 SLAMF9Q96A28 289 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 ZC3H10Q96K80 434 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CXorf58Q96LI9 332 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 FAM173AQ9BQD7 235 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 UQCC2Q9BRT2 126 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 SLCO5A1Q9H2Y9 848 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 MOB1AQ9H8S9 216 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF107Q9UII5 783 aaPredicted RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 GPR160Q9UJ42 338 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 FZR1Q9UM11 496 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 WIPF3A6NGB9 483 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 LRRC3CA6NJW4 275 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 MPTX1A8MV57 137 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 FBXO24O75426 580 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 LYZL6O75951 148 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 TDGF1P13385 188 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 ACP1P24666 158 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 FKBP2P26885 142 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 LSM6P62312 80 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 HGFACQ04756 655 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 OR52H1Q8NGJ2 320 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CPNE4Q96A23 557 aaPredicted RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 HEATR1Q9H583 2144 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 ESRP2Q9H6T0 727 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 TAS2R3Q9NYW6 316 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 NBEAQ8NFP9 2946 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 C9orf170A2RU37 121 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SSX5O60225 188 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SNAPC5O75971 98 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 IL5P05113 134 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF44P15621 663 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SELEP16581 610 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 H3F3AP84243 136 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 HNF4GQ14541 408 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 DEFB109BQ30KR1 87 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 FAM27BQ5VT28 67 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 OR2T2Q6IF00 324 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 HAGHLQ6PII5 290 aaPredicted RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SLC36A1Q7Z2H8 476 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SUN5Q8TC36 379 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 KCNE4Q8WWG9 221 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 PTX4Q96A99 478 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 MYOZ1Q9NP98 299 aaPredicted RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 PNRC2Q9NPJ4 139 aaKnown RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 PRSS50Q9UI38 385 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 LOC102725191A0A1B0GVB3 256 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 A0A1W2PNU3 283 aaPredicted RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 A6NLC8 198 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 KLRC4-KLRK1H3BQV0 150 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 RLN2P04090 185 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 CPN1P15169 458 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 NPBWR2P48146 333 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 ASCL1P50553 236 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF133P52736 654 aaPredicted RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 MALLQ13021 153 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 EIF3IQ13347 325 aaKnown RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 CAMK2BQ13554 666 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SLC22A25Q6T423 547 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 CCDC28AQ8IWP9 274 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SECTM1Q8WVN6 248 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 INTS12Q96CB8 462 aaKnown RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 OR14J1Q9UGF5 321 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SESN1Q9Y6P5 492 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 MED19A0JLT2 244 aaPredicted RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 TNFSF12O43508 249 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 NEURL1O76050 574 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 DIRAS3O95661 229 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 PDGFAP04085 211 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 HPNP05981 417 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 GRPP07492 148 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 OR5H8P0DN80 308 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 GSK3AP49840 483 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 MRPS34P82930 218 aaKnown RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 SRSF4Q08170 494 aaKnown RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 CLVS2Q5SYC1 327 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 LYG2Q86SG7 212 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM123Q8N131 208 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 C17orf78Q8N4C9 275 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 CPNE2Q96FN4 548 aaPredicted RBP8.1□□□□□ -1.11
PRDM9-201ENST00000296682 FER1L6-AS2Q96M78 137 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 OR2H1Q9GZK4 316 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 HEXA-AS1Q9H8Q6 139 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 FBLN5Q9UBX5 448 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 LIPGQ9Y5X9 500 aa8.1□□□□□ -1.11
PRDM9-201ENST00000296682 IGKV1D-8A0A087WSZ0 117 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 HSPA12AO43301 675 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 CD63P08962 238 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 PCBD1P61457 104 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 HERV-K104P61576 105 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 RAB35Q15286 201 aa8.09□□□□□ -1.11
PRDM9-201ENST00000296682 CNN3Q15417 329 aaKnown RBP8.09□□□□□ -1.11
PRDM9-201ENST00000296682 CSRP2Q16527 193 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms