RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 K7EP13 123 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 SSSCA1O60232 199 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 CTAG2O75638 210 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 ZNF17P17021 662 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 COX19Q49B96 90 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 C20orf144Q9BQM9 153 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 TMEM121BQ9BXQ6 578 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 PLEKHF2Q9H8W4 249 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 RCL1Q9Y2P8 373 aaKnown RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 POLR3KQ9Y2Y1 108 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 SELENOKQ9Y6D0 94 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.5□□□□□ -0.73
SNIP1-201ENST00000296215 H3BUT2 72 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 LATO43561 262 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 LDB2O43679 373 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 TBL1XO60907 577 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 IL6RP08887 468 aaPredicted RBP10.5□□□□□ -0.73
SNIP1-201ENST00000296215 P2RY1P47900 373 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 CSNK1G2P78368 415 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 SRSF5Q13243 272 aaKnown RBP10.5□□□□□ -0.73
SNIP1-201ENST00000296215 PHLDA2Q53GA4 152 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 FAM71F2Q6NXP2 309 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 METTL7AQ9H8H3 244 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 HES4Q9HCC6 221 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 ZDHHC3Q9NYG2 299 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
SNIP1-201ENST00000296215 SMIM28A0A1B0GU29 152 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 CDIPTO14735 213 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 GRM6O15303 877 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 IRAK2O43187 625 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 NXPH3O95157 252 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 FTH1P19P0C7X4 201 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 HES1Q14469 280 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 DECR1Q16698 335 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 FDX2Q6P4F2 183 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 AQP10Q96PS8 301 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 SPEF2Q9C093 1822 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 SCGB1A1P11684 91 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 HIST1H1DP16402 221 aaKnown RBP10.5□□□□□ -0.73
SNIP1-201ENST00000296215 LIM2P55344 173 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 ACOT4Q8N9L9 421 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 FER1L6-AS1Q8NA97 138 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 TSSK2Q96PF2 358 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 ELOVL3Q9HB03 270 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 SF3B6Q9Y3B4 125 aaKnown RBP10.5□□□□□ -0.73
SNIP1-201ENST00000296215 CACNA1CQ13936 2221 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 TMEM225BP0DP42 221 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 PXNP49023 591 aaPredicted RBP10.5□□□□□ -0.73
SNIP1-201ENST00000296215 DMWDQ09019 674 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 NUP43Q8NFH3 380 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 SGMS2Q8NHU3 365 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 C5AR2Q9P296 337 aa10.5□□□□□ -0.73
SNIP1-201ENST00000296215 DANCRP0C864 163 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 IER3P46695 156 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 GPR12P47775 334 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 PRICKLE4Q2TBC4 344 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 PNKDQ8N490 385 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 TOP6BLQ8N6T0 577 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 A6NJY4 79 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 FIGNL2A6NMB9 653 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 ZNF205O95201 554 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 Q6ZVU0 165 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 AGBL5Q8NDL9 886 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 OR10V1Q8NGI7 309 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 OR4S2Q8NH73 311 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 TMEM170AQ8WVE7 144 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 TMEM59Q9BXS4 323 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 BANF2Q9H503 90 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 H7C1C5 153 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 HCRTO43612 131 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 LIPFP07098 398 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 C8AP07357 584 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 SLC10A6Q3KNW5 377 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 TAS1R1Q7RTX1 841 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 TGIF2LYQ8IUE0 185 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 OR10AG1Q8NH19 301 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 MAGT1Q9H0U3 335 aa10.49□□□□□ -0.73
SNIP1-201ENST00000296215 PIK3C2BO00750 1634 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 B4DGG1 531 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SIRPB1O00241 398 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 DNPH1O43598 174 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 FUT5Q11128 374 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 OR5D14Q8NGL3 314 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 OR5C1Q8NGR4 320 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 OR1B1Q8NGR6 318 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 MAGEH1Q9H213 219 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 IGFLR1Q9H665 355 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 HIF1ANQ9NWT6 349 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 CITO14578 2027 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 C17orf112F2Z3M2 114 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SYNGR4O95473 234 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 SCGB1C2P0DMR2 95 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 THPOP40225 353 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 TCL1AP56279 114 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 HSD52Q0P140 79 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 LINC01551Q86U37 167 aa10.48□□□□□ -0.73
SNIP1-201ENST00000296215 PIANPQ8IYJ0 282 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms