RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 NKAIN2Q5VXU1 208 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 STAC2Q6ZMT1 411 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 OR52N4Q8NGI2 321 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 TP53RKQ96S44 253 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 SEMA7AO75326 666 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 HMGA2P52926 109 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 ASTLQ6HA08 431 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 RABEPKQ7Z6M1 372 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 SLAMF6Q96DU3 332 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 RLFQ13129 1914 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 PRRT4C9JH25 899 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 INPP5JQ15735 1006 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 SSX1Q16384 188 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 TPSD1Q9BZJ3 242 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 NAGKQ9UJ70 344 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF552Q9H707 407 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 AKIRIN1Q9H9L7 192 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 SBF1O95248 1867 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 CD38P28907 300 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 CHRNA7P36544 502 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 PRSS3P2Q8NHM4 247 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 DUXBA0A1W2PPF3 345 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 FGF17O60258 216 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 NPY1RP25929 384 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 APOBEC1P41238 236 aaKnown RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 MMP15P51511 669 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 RRADP55042 308 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 PPP2CAP67775 309 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF816Q0VGE8 651 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 TMEM128Q5BJH2 165 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 DCAF12Q5T6F0 453 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 IL20Q9NYY1 176 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 TBC1D29Q9UFV1 150 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 POLDIP2Q9Y2S7 368 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 FREM1Q5H8C1 2179 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 MAP1LC3B2A6NCE7 125 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 ATP6V1FQ16864 119 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 OR2D3Q8NGH3 330 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 SPPL3Q8TCT6 385 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 ASB16Q96NS5 453 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 TRAF4Q9BUZ4 470 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 MAP1LC3BQ9GZQ8 125 aa8.87□□□□□ -0.99
COL6A3-201ENST00000295550 ISG20L2Q9H9L3 353 aaKnown RBP8.87□□□□□ -0.99
COL6A3-201ENST00000295550 C5orf49A4QMS7 147 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 BMP5P22003 454 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ZDHHC23Q8IYP9 409 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 SLC25A43Q8WUT9 341 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ACY3Q96HD9 319 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 EDEM2Q9BV94 578 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 CCL27Q9Y4X3 112 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 NPIPB8E9PQR5 432 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 EIF4E2O60573 245 aaKnown RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ONECUT2O95948 504 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 GUSBP08236 651 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 BMI1P35226 326 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 RPS23P62266 143 aaKnown RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 PNLIPRP3Q17RR3 467 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 BAHD1Q8TBE0 780 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 FGF8P55075 233 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ABI3BPQ7Z7G0 1075 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 OR8D4Q8NGM9 314 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 POM121L2Q96KW2 1035 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 HES4Q9HCC6 221 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ACAA1P09110 424 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 GPX7Q96SL4 187 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 FGF22Q9HCT0 170 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 P4HTMQ9NXG6 502 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 HSPB8Q9UJY1 196 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 R4GMQ9 66 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 K7ERU9 68 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 M0R135 149 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 CST4P01036 141 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ARR3P36575 388 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 FAM3AP98173 230 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 LIPNQ5VXI9 398 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 OR4A47Q6IF82 309 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ZNF799Q96GE5 643 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 F5H697 171 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 CSRP3P50461 194 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 BPIFA4PQ86YQ2 179 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 C11orf40Q8WZ69 217 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ELSPBP1Q96BH3 223 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 MRPS24Q96EL2 167 aaKnown RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 MAP1LC3CQ9BXW4 147 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 GPANK1O95872 356 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 HPP00738 406 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 OR1C1Q15619 314 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 SLC25A35Q3KQZ1 300 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 MAML2Q8IZL2 1156 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-201ENST00000295550 OR4D10Q8NGI6 311 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 MOB3AQ96BX8 217 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 CYSLTR2Q9NS75 346 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 C20orf141Q9NUB4 165 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 EID2BQ96D98 161 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 MEGF10Q96KG7 1140 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 RNF24Q9Y225 148 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 ST3GAL6Q9Y274 331 aa8.86□□□□□ -0.99
COL6A3-201ENST00000295550 LINC01553A4QN01 128 aa8.85□□□□□ -0.99
COL6A3-201ENST00000295550 LINC00303Q3SY05 128 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms