RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 RFX2P48378 723 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 OR10A3P58181 314 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 SNRPD2P62316 118 aaKnown RBP12.86□□□□□ -0.35
CCDC140-201ENST00000295226 PITPNAQ00169 270 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 MAB21L1Q13394 359 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 CEACAM21Q3KPI0 293 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 PYHIN1Q6K0P9 492 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 UTS2BQ765I0 119 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 KRT74Q7RTS7 529 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 WDR86Q86TI4 376 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 NR2C2APQ86WQ0 139 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 HPS1Q92902 700 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 HIST1H2AAQ96QV6 131 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 GFI1Q99684 422 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 TRAF4Q9BUZ4 470 aaPredicted RBP12.86□□□□□ -0.35
CCDC140-201ENST00000295226 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 MPC1Q9Y5U8 109 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 IGKV1-27A0A075B6S5 117 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 ANXA2P2A6NMY6 339 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 C17orf100A8MU93 164 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 ZNF732B4DXR9 585 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 C3orf80F5H4A9 247 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 GRPP07492 148 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 HCKP08631 526 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 FSTP19883 344 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 CDKN1AP38936 164 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 PITPNBP48739 271 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 CCL8P80075 99 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 DTX2Q86UW9 622 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 SAMD12Q8N8I0 201 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 ENKURQ8TC29 256 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 CACNG6Q9BXT2 260 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 RBFOX1Q9NWB1 397 aaKnown RBP12.86□□□□□ -0.35
CCDC140-201ENST00000295226 TREM2Q9NZC2 230 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 CGGBP1Q9UFW8 167 aaPredicted RBP12.86□□□□□ -0.35
CCDC140-201ENST00000295226 FOXJ3Q9UPW0 622 aa12.86□□□□□ -0.35
CCDC140-201ENST00000295226 A0A1B0GWJ7 208 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 PLATP00750 562 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 BDKRB2P30411 391 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 EIF2B2P49770 351 aaKnown RBP12.85□□□□□ -0.35
CCDC140-201ENST00000295226 MPPED2Q15777 294 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 PRAMEF6Q5VXH4 476 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 CRIP3Q6Q6R5 217 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 OR5D18Q8NGL1 313 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 TMEM138Q9NPI0 162 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 SPATA2Q9UM82 520 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 SLC7A11Q9UPY5 501 aa12.85□□□□□ -0.35
CCDC140-201ENST00000295226 POLQO75417 2590 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 LY6HO94772 140 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 SSTR2P30874 369 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 TNFAIP6P98066 277 aaPredicted RBP12.84□□□□□ -0.35
CCDC140-201ENST00000295226 HOXA4Q00056 320 aaPredicted RBP12.84□□□□□ -0.35
CCDC140-201ENST00000295226 TGIF2LYQ8IUE0 185 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 OR5A2Q8NGI9 324 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 ITLN1Q8WWA0 313 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 OR2V2Q96R30 315 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 MICU1Q9BPX6 476 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 C11orf54Q9H0W9 315 aaPredicted RBP12.84□□□□□ -0.35
CCDC140-201ENST00000295226 CXXC4Q9H2H0 198 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 ZDHHC8Q9ULC8 765 aa12.84□□□□□ -0.35
CCDC140-201ENST00000295226 PQLC2LA1A4F0 135 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 TPD52L2O43399 206 aaKnown RBP12.83□□□□□ -0.35
CCDC140-201ENST00000295226 NDUFS7O75251 213 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 FUT6P51993 359 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 MTCP1P56278 107 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 SCAND1P57086 179 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 P2RY14Q15391 338 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 CNN3Q15417 329 aaKnown RBP12.83□□□□□ -0.35
CCDC140-201ENST00000295226 ZNF826PQ6ZT77 177 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 CALHM1Q8IU99 346 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 BATF2Q8N1L9 274 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 JAGN1Q8N5M9 183 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 CELF2-AS1Q8N7Q2 184 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 DUSP18Q8NEJ0 188 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 ITFG2Q969R8 447 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 BORCS8Q96FH0 119 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 MEGF10Q96KG7 1140 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 RTL8AQ9BWD3 113 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 MS4A5Q9H3V2 200 aa12.83□□□□□ -0.35
CCDC140-201ENST00000295226 APCP25054 2843 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.36
CCDC140-201ENST00000295226 PLA2G10O15496 165 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 TPPPO94811 219 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 PRKACBP22694 351 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 KISS1Q15726 138 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 PLET1Q6UQ28 207 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
CCDC140-201ENST00000295226 OR4M1Q8NGD0 313 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 SORCS2Q96PQ0 1159 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 CCL19Q99731 98 aa12.83□□□□□ -0.36
CCDC140-201ENST00000295226 AIPO00170 330 aa12.82□□□□□ -0.36
CCDC140-201ENST00000295226 LYRM1O43325 122 aa12.82□□□□□ -0.36
CCDC140-201ENST00000295226 SPRY1O43609 319 aaPredicted RBP12.82□□□□□ -0.36
CCDC140-201ENST00000295226 ALX3O95076 343 aa12.82□□□□□ -0.36
CCDC140-201ENST00000295226 HPXP02790 462 aa12.82□□□□□ -0.36
CCDC140-201ENST00000295226 EIF4EP06730 217 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms