RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 RPUSD3Q6P087 351 aaKnown RBP16.78■□□□□ 0.28
LSM12-201ENST00000293406 LRRC18Q8N456 261 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 OR6C1Q96RD1 312 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 CLCC1Q96S66 551 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 PIGQQ9BRB3 760 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 TIMM10BQ9Y5J6 103 aa16.78■□□□□ 0.28
LSM12-201ENST00000293406 OR5H8P0DN80 308 aa16.77■□□□□ 0.28
LSM12-201ENST00000293406 AKR1C3P42330 323 aa16.77■□□□□ 0.28
LSM12-201ENST00000293406 HMGN3Q15651 99 aa16.77■□□□□ 0.28
LSM12-201ENST00000293406 ERGIC1Q969X5 290 aa16.77■□□□□ 0.28
LSM12-201ENST00000293406 SPACA9Q96E40 222 aaPredicted RBP16.77■□□□□ 0.28
LSM12-201ENST00000293406 Q96M66 194 aa16.77■□□□□ 0.28
LSM12-201ENST00000293406 PCED1AQ9H1Q7 454 aa16.77■□□□□ 0.28
LSM12-201ENST00000293406 DECR2Q9NUI1 292 aa16.77■□□□□ 0.28
LSM12-201ENST00000293406 HOXB1P14653 301 aaPredicted RBP16.76■□□□□ 0.27
LSM12-201ENST00000293406 PIGPP57054 158 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 PHYHD1Q5SRE7 291 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 RPS10P5Q9NQ39 176 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 EDARQ9UNE0 448 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 KCNIP3Q9Y2W7 256 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 ADAMTS20P59510 1910 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 PRSS44E7EML9 344 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 SCRG1O75711 98 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 EIF3GO75821 320 aaKnown RBP eCLIP16.76■□□□□ 0.27
LSM12-201ENST00000293406 PTAFRP25105 342 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 FKBP2P26885 142 aaKnown RBP16.76■□□□□ 0.27
LSM12-201ENST00000293406 SNRPEP62304 92 aaKnown RBP16.76■□□□□ 0.27
LSM12-201ENST00000293406 RSPO1Q2MKA7 263 aaPredicted RBP16.76■□□□□ 0.27
LSM12-201ENST00000293406 MIDNQ504T8 468 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 PRAMEF20Q5VT98 475 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 FADS6Q8N9I5 356 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 RASL10BQ96S79 203 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 EGLN1Q9GZT9 426 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 STARD10Q9Y365 291 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 CEP290O15078 2479 aa16.76■□□□□ 0.27
LSM12-201ENST00000293406 C1orf196B1AJZ1 125 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 E5RGE8 158 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 M0R135 149 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 LBX1P52954 281 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 C10orf128Q5T292 105 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 CLEC9AQ6UXN8 241 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 TOMM40LQ969M1 308 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 C10orf35Q96D05 121 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 ZNF799Q96GE5 643 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 FAAP24Q9BTP7 215 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 NSG2Q9Y328 171 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 ARID1AO14497 2285 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 ZNF850A8MQ14 1090 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 MBPP02686 304 aaPredicted RBP16.75■□□□□ 0.27
LSM12-201ENST00000293406 DBHP09172 617 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 MTCP1P56278 107 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 CHAF1BQ13112 559 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 RSPO4Q2I0M5 234 aaPredicted RBP16.75■□□□□ 0.27
LSM12-201ENST00000293406 SP6Q3SY56 376 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 PLXDC2Q6UX71 529 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 ZNF574Q6ZN55 896 aaPredicted RBP16.75■□□□□ 0.27
LSM12-201ENST00000293406 DEFB126Q9BYW3 111 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 LIME1Q9H400 295 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 GPR173Q9NS66 373 aa16.75■□□□□ 0.27
LSM12-201ENST00000293406 ABCA7Q8IZY2 2146 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 MSTNO14793 375 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 NME2P1O60361 137 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 OTX1P32242 354 aaPredicted RBP16.74■□□□□ 0.27
LSM12-201ENST00000293406 SNCAP37840 140 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 RRADP55042 308 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 ZNF616Q08AN1 781 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 Q6ZSR3 168 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 HIST1H2BAQ96A08 127 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 NABP1Q96AH0 204 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 RBM24Q9BX46 236 aaKnown RBP16.74■□□□□ 0.27
LSM12-201ENST00000293406 NECAP2Q9NVZ3 263 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 PLEK2Q9NYT0 353 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 CA14Q9ULX7 337 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 H3F3AP84243 136 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 HGFACQ04756 655 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 TAF9Q16594 264 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 ABCA11PQ4W5N1 156 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 TMEM54Q969K7 222 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 METTL9Q9H1A3 318 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 ARV1Q9H2C2 271 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 RGCCQ9H4X1 137 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 AK3Q9UIJ7 227 aa16.74■□□□□ 0.27
LSM12-201ENST00000293406 NCOA6Q14686 2063 aaPredicted RBP16.73■□□□□ 0.27
LSM12-201ENST00000293406 MED12Q93074 2177 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 BORCS7-ASMTA0A0B4J1R7 106 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 TOX3O15405 576 aaPredicted RBP16.73■□□□□ 0.27
LSM12-201ENST00000293406 ANGPTL7O43827 346 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 OR5AC1P0C628 307 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 SEC11BP0C7V7 166 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 DANCRP0C864 163 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 ZNF728P0DKX0 622 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 SRFP11831 508 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 OPRM1P35372 400 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 HIST1H3AP68431 136 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 RSU1Q15404 277 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 GUK1Q16774 197 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 SNAI3Q3KNW1 292 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 HIST2H3PS2Q5TEC6 136 aa16.73■□□□□ 0.27
LSM12-201ENST00000293406 HIST2H3AQ71DI3 136 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms