RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 B3GALNT1O75752 331 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 SLC37A1P57057 533 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 VMA21Q3ZAQ7 101 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 MESTQ5EB52 335 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 GFRALQ6UXV0 394 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 MUC20Q8N307 709 aaPredicted RBP11.37□□□□□ -0.59
PTCD1-201ENST00000292478 ADGRG7Q96K78 797 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 NDFIP1Q9BT67 221 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 NAA60Q9H7X0 242 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 CNTD2Q9H8S5 307 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 GNB4Q9HAV0 340 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 MMP26Q9NRE1 261 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 CLEC1BQ9P126 229 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 KIAA1217Q5T5P2 1943 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 COL4A1P02462 1669 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 TRGV8A0A0C4DH27 118 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 RXFP4Q8TDU9 374 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 PLSCR3Q9NRY6 295 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 GPANK1O95872 356 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 HRASP01112 189 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 CST2P09228 141 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 OR5G3P0C626 314 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 DNPH1O43598 174 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 S100A8P05109 93 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 CLEC3BP05452 202 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 SLC6A1P30531 599 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 SKP2Q13309 424 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 PPP1R1AQ13522 171 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 INSL4Q14641 139 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 NCR3LG1Q68D85 454 aa11.37□□□□□ -0.59
PTCD1-201ENST00000292478 DVL1O14640 695 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 CD1AP06126 327 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 ACSM4P0C7M7 580 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 PNLIPP16233 465 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 DVL1P1P54792 670 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-201ENST00000292478 SPATA46Q5T0L3 261 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 OR5D13Q8NGL4 314 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 RASL10BQ96S79 203 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 A0A1B0GTQ1 180 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 TCRBV16S1A1N1A0A5B0 115 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 IFI6P09912 130 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 CD226Q15762 336 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 CCDC71Q8IV32 467 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-201ENST00000292478 GINS3Q9BRX5 216 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 DUSP15Q9H1R2 295 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-201ENST00000292478 TMEM231Q9H6L2 316 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 SLC35D1Q9NTN3 355 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 CES1P1Q9UKY3 287 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 IGHV3-64DA0A0J9YX35 117 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 OR7C2O60412 319 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 FBP1P09467 338 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 CBR1P16152 277 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 OR2B8PP59922 312 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 HLXQ14774 488 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-201ENST00000292478 MICBQ29980 383 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 PRSS54Q6PEW0 395 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 C17orf107Q6ZR85 190 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 CABLES2Q9BTV7 478 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-201ENST00000292478 LRRC37AA6NMS7 1700 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 ARFGEF1Q9Y6D6 1849 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 C3orf85A0A1B0GTC6 90 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 C21orf140B9A014 251 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 RNASEK-C17orf49H0YIS7 233 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 OR3A4PP47883 348 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF816Q0VGE8 651 aaPredicted RBP11.36□□□□□ -0.59
PTCD1-201ENST00000292478 MRGPREQ86SM8 312 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 OR10V1Q8NGI7 309 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 OR5B3Q8NH48 314 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 TMEM56Q96MV1 263 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 TPPP3Q9BW30 176 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 WDR54Q9H977 334 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 RASL12Q9NYN1 266 aa11.36□□□□□ -0.59
PTCD1-201ENST00000292478 ACTL6AO96019 429 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 SEMG1P04279 462 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 CTSDP07339 412 aaPredicted RBP11.35□□□□□ -0.59
PTCD1-201ENST00000292478 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
PTCD1-201ENST00000292478 OR2T2Q6IF00 324 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 SFTPA1Q8IWL2 248 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 RPS4Y2Q8TD47 263 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 RPUSD4Q96CM3 377 aaKnown RBP11.35□□□□□ -0.59
PTCD1-201ENST00000292478 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
PTCD1-201ENST00000292478 MBD1Q9UIS9 605 aaPredicted RBP11.35□□□□□ -0.59
PTCD1-201ENST00000292478 C9orf152Q5JTZ5 239 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 OR8U1Q8NH10 309 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 PTPMT1Q8WUK0 201 aaPredicted RBP11.35□□□□□ -0.59
PTCD1-201ENST00000292478 ABHD1Q96SE0 405 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 COX7A2P2O60397 106 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 BGLAPP02818 100 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 AKR1C3P42330 323 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 OR2Z1Q8NG97 314 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 OR8B12Q8NGG6 310 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 FAAP24Q9BTP7 215 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 PECRQ9BY49 303 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 UQCC1Q9NVA1 299 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 V9GYH0 126 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 OR5H15A6NDH6 313 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 CHEK1O14757 476 aa11.35□□□□□ -0.59
PTCD1-201ENST00000292478 CEACAM6P40199 344 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms