RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 FZR1Q9UM11 496 aa13.68□□□□□ -0.22
SHROOM4-201ENST00000289292 CRYBA1P05813 215 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 ARR3P36575 388 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 FUT6P51993 359 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 FAM53BQ14153 422 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 PWWP2BQ6NUJ5 590 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 WDR34Q96EX3 536 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 WSB1Q9Y6I7 421 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 MIA3Q5JRA6 1907 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 C3orf85A0A1B0GTC6 90 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 A0A1W2PR80 420 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 RFLNBQ8N5W9 214 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 OR10G3Q8NGC4 313 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 OR1N1Q8NGS0 311 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 FAM210BQ96KR6 192 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 POLDIP2Q9Y2S7 368 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 AMDHD2Q9Y303 409 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 CLEC3BP05452 202 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 HIST1H3AP68431 136 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 OR10X1Q8NGY0 326 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 PIAS2O75928 621 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 RPL11P62913 178 aaKnown RBP13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 MPPED2Q15777 294 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 EDEM2Q9BV94 578 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 C4orf47A7E2U8 309 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 TCAPO15273 167 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 GABRA1P14867 456 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 RANP62826 216 aaKnown RBP13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 TIGITQ495A1 244 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 MESTQ5EB52 335 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 MCHR2Q969V1 340 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 GINS3Q9BRX5 216 aa13.67□□□□□ -0.22
SHROOM4-201ENST00000289292 TMEM33P57088 247 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 PRSS54Q6PEW0 395 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 PTP4A1Q93096 173 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 FER1L6-AS2Q96M78 137 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 C19orf43Q9BQ61 176 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF576Q9H609 170 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 NHSL1Q5SYE7 1610 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 PATE4P0C8F1 98 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 HLA-CQ95604 372 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 SDK1Q7Z5N4 2213 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 HRKO00198 91 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 TERTO14746 1132 aaKnown RBP13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 TBX19O60806 448 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 DUS4LO95620 317 aaKnown RBP13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 PAX6P26367 422 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 CTGFP29279 349 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 EFNB2P52799 333 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 PTTG1IPP53801 180 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 C19orf57Q0VDD7 668 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 OR1F12Q8NHA8 337 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 TAAR6Q96RI8 345 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 NAT2P11245 290 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 CHRNA7P36544 502 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 C1QL3Q5VWW1 255 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 Q6ZS52 159 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 SLC25A22Q9H936 323 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF275Q9NSD4 429 aaPredicted RBP13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 GHRLQ9UBU3 117 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 SOCS1O15524 211 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 DYNLT3P51808 116 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF774Q6NX45 483 aa13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 SIRT4Q9Y6E7 314 aaPredicted RBP13.66□□□□□ -0.22
SHROOM4-201ENST00000289292 IGHV5-51A0A0C4DH38 117 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 ANKRD34CP0C6C1 535 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 VN1R4Q7Z5H5 301 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 TMEM178AQ8NBL3 297 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNRF4Q8WWF5 429 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 GNRHR2Q96P88 292 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF835Q9Y2P0 537 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 PCDHGA9Q9Y5G4 932 aaKnown RBP13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 LIPGQ9Y5X9 500 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 ERVH48-1M5A8F1 160 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 OGG1O15527 345 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 IGHA1P01876 353 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 SELEP16581 610 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 USF1P22415 310 aaPredicted RBP13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 FKBP2P26885 142 aaKnown RBP13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 CCL7P80098 99 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 GTF2H5Q6ZYL4 71 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 GPR137Q96N19 417 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 A0A1W2PPC4 97 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 CDRT15L2A8MXV6 281 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 K7EQM0 130 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 PLPP3O14495 311 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 CTDSPLO15194 276 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 CEACAM6P40199 344 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 PTCRAQ6ISU1 281 aaPredicted RBP13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 CLEC18BQ6UXF7 455 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 ZAR1Q86SH2 424 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 MS4A10Q96PG2 267 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 OR2A5Q96R48 311 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 PECRQ9BY49 303 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 TRAV8-7A0A075B6U6 113 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 IFITM2Q01629 132 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 LHFPL5Q8TAF8 219 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 ACY3Q96HD9 319 aa13.65□□□□□ -0.22
SHROOM4-201ENST00000289292 ZNF737O75373 536 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms