RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PECRQ9BY49 303 aa13.97□□□□□ -0.17
SMAD6-201ENST00000288840 SHANK1Q9Y566 2161 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 CCDC187A0A096LP49 1063 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 GJE1A6NN92 205 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 HPNP05981 417 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 MPGP29372 298 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 SNAI3Q3KNW1 292 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 ANKRD55Q3KP44 614 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 SPATA46Q5T0L3 261 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 BEND4Q6ZU67 534 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 POC1BQ8TC44 478 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 AKR1E2Q96JD6 320 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 ALX4Q9H161 411 aaPredicted RBP13.96□□□□□ -0.17
SMAD6-201ENST00000288840 C5orf66Q9H5L9 145 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 ESRP2Q9H6T0 727 aaKnown RBP13.96□□□□□ -0.17
SMAD6-201ENST00000288840 RHOFQ9HBH0 211 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 ZNF286AQ9HBT8 521 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 SNAPINO95295 136 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 S100GP29377 79 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 TMEM50BP56557 158 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 UBE2V2Q15819 145 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 SPINK14Q6IE38 97 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 OR2A2Q6IF42 318 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 OR10Z1Q8NGY1 313 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 OR13G1Q8NGZ3 307 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 ABHD3Q8WU67 409 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 EMG1Q92979 244 aaKnown RBP13.96□□□□□ -0.17
SMAD6-201ENST00000288840 TCEAL3Q969E4 200 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 MRPL24Q96A35 216 aaKnown RBP13.96□□□□□ -0.17
SMAD6-201ENST00000288840 THOC3Q96J01 351 aaKnown RBP13.96□□□□□ -0.17
SMAD6-201ENST00000288840 P4HTMQ9NXG6 502 aa13.96□□□□□ -0.17
SMAD6-201ENST00000288840 C5orf49A4QMS7 147 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 TUBAL3A6NHL2 446 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 HLA-HP01893 362 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 DAOP14920 347 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 NFYBP25208 207 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 DUSP3P51452 185 aaPredicted RBP13.96□□□□□ -0.18
SMAD6-201ENST00000288840 CSRP2Q16527 193 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 HSD17B13Q7Z5P4 300 aaPredicted RBP13.96□□□□□ -0.18
SMAD6-201ENST00000288840 OR5AP2Q8NGF4 316 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 C14orf79Q96F83 325 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 DMRTA2Q96SC8 542 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 B3GAT1Q9P2W7 334 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 LTBP2Q14767 1821 aa13.96□□□□□ -0.18
SMAD6-201ENST00000288840 TLE1Q04724 770 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 TMEM164Q5U3C3 297 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 WDSUB1Q8N9V3 476 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 PRDM6Q9NQX0 595 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 EDARQ9UNE0 448 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 HPP00738 406 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 ISG15P05161 165 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 OR5AC1P0C628 307 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 IGFBP3P17936 291 aaPredicted RBP13.95□□□□□ -0.18
SMAD6-201ENST00000288840 CYB561P49447 251 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 ABCD4O14678 606 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 GP1BAP07359 652 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 HAAOP46952 286 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 ARL6IP1Q15041 203 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 C3AR1Q16581 482 aa13.95□□□□□ -0.18
SMAD6-201ENST00000288840 TMEM182Q6ZP80 229 aaPredicted RBP13.95□□□□□ -0.18
SMAD6-201ENST00000288840 ZSCAN4Q8NAM6 433 aaPredicted RBP13.95□□□□□ -0.18
SMAD6-201ENST00000288840 A0A1B0GTI1 187 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 A0A1W2PR80 420 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 CST7O76096 145 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 ONECUT2O95948 504 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF735P0CB33 412 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF273Q14593 569 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 TMEM268Q5VZI3 342 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 GGNBP1Q5YKI7 109 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 ADAM5Q6NVV9 412 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 KCNJ16Q9NPI9 418 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 NECAP2Q9NVZ3 263 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 LRFN1Q9P244 771 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 URGCP-MRPS24S4R325 110 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 TRAV39A0A0B4J263 110 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 RNF222A6NCQ9 220 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 AQP7P3A6NL99 342 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 A6NLC8 198 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 C1QL1O75973 258 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 FPR2P25090 351 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 ZNF468Q5VIY5 522 aaPredicted RBP13.94□□□□□ -0.18
SMAD6-201ENST00000288840 FOXB1Q99853 325 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 FBXL17Q9UF56 701 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 DOCK10Q96BY6 2186 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 DHRS7CA6NNS2 312 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 ZP4Q12836 540 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 DCAF12Q5T6F0 453 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 CLRN3Q8NCR9 226 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 OR11L1Q8NGX0 322 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 OR14J1Q9UGF5 321 aa13.94□□□□□ -0.18
SMAD6-201ENST00000288840 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 IGLV3-19P01714 112 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 PIK3IP1Q96FE7 263 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 VPS13AQ96RL7 3174 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 CBR3O75828 277 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 VAMP5O95183 116 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 TK1P04183 234 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 DSCR4P56555 118 aaPredicted RBP13.93□□□□□ -0.18
SMAD6-201ENST00000288840 TMEM33P57088 247 aa13.93□□□□□ -0.18
SMAD6-201ENST00000288840 EXT1Q16394 746 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms