RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 OR10AC1Q8NH08 325 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 HAVCR2Q8TDQ0 301 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 TFAP2CQ92754 450 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 BORCS8Q96FH0 119 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 TMEM80Q96HE8 168 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 ZNF488Q96MN9 340 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 CHCHD3Q9NX63 227 aaKnown RBP20.88■□□□□ 0.93
PDF-201ENST00000288022 DUX4Q9UBX2 424 aa20.88■□□□□ 0.93
PDF-201ENST00000288022 CAB39Q9Y376 341 aaPredicted RBP20.88■□□□□ 0.93
PDF-201ENST00000288022 WNK2Q9Y3S1 2297 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 TRBV2A0A0J9YWF9 115 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 TMEM212A6NML5 194 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 OR2AT4A6NND4 320 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 NDUFB3O43676 98 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 TFF1P04155 84 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 OCM2P0CE71 109 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 OCMP0CE72 109 aaPredicted RBP20.87■□□□□ 0.93
PDF-201ENST00000288022 GABRA2P47869 451 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 FUT6P51993 359 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 AQP4P55087 323 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 OR2G6Q5TZ20 316 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 OR5AK2Q8NH90 309 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 GGHQ92820 318 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 DNTTIP1Q9H147 329 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 RASL12Q9NYN1 266 aa20.87■□□□□ 0.93
PDF-201ENST00000288022 EFCAB10A6NFE3 127 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 XPNPEP2O43895 674 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 ZFPL1O95159 310 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 PLATP00750 562 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 TGM4P49221 684 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 GTF2A1P52655 376 aaPredicted RBP20.86■□□□□ 0.93
PDF-201ENST00000288022 SMIM21Q3B7S5 101 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 LRRC10Q5BKY1 277 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 ATPAF1Q5TC12 328 aaPredicted RBP20.86■□□□□ 0.93
PDF-201ENST00000288022 BTN2A1Q7KYR7 527 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 CALHM1Q8IU99 346 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 BATF2Q8N1L9 274 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 FGFRL1Q8N441 504 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 BPIFB6Q8NFQ5 453 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 ANGPTL6Q8NI99 470 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 DACT3Q96B18 629 aaPredicted RBP20.86■□□□□ 0.93
PDF-201ENST00000288022 MED30Q96HR3 178 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 PDCD1LG2Q9BQ51 273 aa20.86■□□□□ 0.93
PDF-201ENST00000288022 DOCK11Q5JSL3 2073 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 TCF21O43680 179 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 FCN3O75636 299 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 NXPH2O95156 264 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 RPSAP08865 295 aaKnown RBP20.85■□□□□ 0.93
PDF-201ENST00000288022 PGA5P0DJD9 388 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 AMY2BP19961 511 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 IL13RA1P78552 427 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 ST3GAL4Q11206 333 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 ACP7Q6ZNF0 438 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 PNLDC1Q8NA58 520 aaKnown RBP20.85■□□□□ 0.93
PDF-201ENST00000288022 TSEN15Q8WW01 171 aaKnown RBP20.85■□□□□ 0.93
PDF-201ENST00000288022 GAFA1Q96PS6 74 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 PKIBQ9C010 78 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 VCX3BQ9H321 246 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 CLEC2DQ9UHP7 191 aa20.85■□□□□ 0.93
PDF-201ENST00000288022 H0YJX3 145 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 RGS9O75916 674 aaPredicted RBP20.84■□□□□ 0.93
PDF-201ENST00000288022 ECDO95905 644 aaPredicted RBP20.84■□□□□ 0.93
PDF-201ENST00000288022 FSHBP01225 129 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 PSG2P11465 335 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 SELLP14151 372 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 ATF1P18846 271 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 MPZP25189 248 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 ATP1B3P54709 279 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 SRSF2Q01130 221 aaKnown RBP20.84■□□□□ 0.93
PDF-201ENST00000288022 IL24Q13007 206 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 LAIR2Q6ISS4 152 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 ZNF788Q6ZQV5 615 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 UTS2BQ765I0 119 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 FBLIM1Q8WUP2 373 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 SVEP1Q4LDE5 3571 aa20.84■□□□□ 0.93
PDF-201ENST00000288022 IGKV1D-17A0A075B6S4 117 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 IGKV1-27A0A075B6S5 117 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 INMTO95050 263 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 LIPFP07098 398 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 ACAA1P09110 424 aaPredicted RBP20.83■□□□□ 0.93
PDF-201ENST00000288022 PIPP12273 146 aaPredicted RBP20.83■□□□□ 0.93
PDF-201ENST00000288022 PRKACBP22694 351 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 AZGP1P25311 298 aaKnown RBP20.83■□□□□ 0.93
PDF-201ENST00000288022 RBP2P50120 134 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 FGF12P61328 243 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 RPL22L1Q6P5R6 122 aaKnown RBP20.83■□□□□ 0.93
PDF-201ENST00000288022 AHSA2Q719I0 299 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 STX19Q8N4C7 294 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 BPIFB2Q8N4F0 458 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 DNAAF1Q8NEP3 725 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 ZNF418Q8TF45 676 aaPredicted RBP20.83■□□□□ 0.93
PDF-201ENST00000288022 C22orf15Q8WYQ4 148 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 H1FXQ92522 213 aaKnown RBP20.83■□□□□ 0.93
PDF-201ENST00000288022 MDFIQ99750 246 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 NRIP2Q9BQI9 281 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 CNOT2Q9NZN8 540 aaKnown RBP20.83■□□□□ 0.93
PDF-201ENST00000288022 NUP50Q9UKX7 468 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 DHDHQ9UQ10 334 aa20.83■□□□□ 0.93
PDF-201ENST00000288022 IGKV1-9A0A0C4DH69 117 aa20.82■□□□□ 0.92
PDF-201ENST00000288022 RNF212BA8MTL3 300 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms