RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 UBE2L3P68036 154 aaKnown RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 RELBQ01201 579 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 BTN1A1Q13410 526 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 STAC2Q6ZMT1 411 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TMEM182Q6ZP80 229 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 LINC00596Q86U02 117 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR52I1Q8NGK6 324 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR4Q3Q8NH05 313 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 RANGRFQ9HD47 186 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 WBP1LQ9NX94 342 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 HCSTQ9UBK5 93 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TMPRSS11DO60235 418 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 RPL34P49207 117 aaKnown RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 BTG2P78543 158 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR2B11Q5JQS5 317 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 COX20Q5RI15 118 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 FAHD2BQ6P2I3 314 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TMPRSS11FQ6ZWK6 438 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 MRGPREQ86SM8 312 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 LINC01465Q8N7H1 131 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 STPG3Q8N7X2 389 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 NUDCD2Q8WVJ2 157 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TMED6Q8WW62 240 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 FAHD2AQ96GK7 314 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 MRPS16Q9Y3D3 137 aaKnown RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 URGCP-MRPS24S4R325 110 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PAPPAQ13219 1627 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 UBE2L5PA0A1B0GUS4 154 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 MAP1LC3B2A6NCE7 125 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 B4E171 279 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TRIM77I1YAP6 450 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 ADAM20O43506 726 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 SPRY3O43610 288 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 CCR6P51684 374 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 ELOBQ15370 118 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 DHRS13Q6UX07 377 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PDPNQ86YL7 162 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 DUSP18Q8NEJ0 188 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR4D10Q8NGI6 311 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 CLDN23Q96B33 292 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 CMBLQ96DG6 245 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TVP23CQ96ET8 276 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR8B4Q96RC9 309 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 MAP1LC3BQ9GZQ8 125 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TECRQ9NZ01 308 aaKnown RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PAPPA2Q9BXP8 1791 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 RFPL4AA6NLU0 287 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 RFPL4AL1F8VTS6 287 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 C16orf97H3BN30 126 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TO15178 435 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TFAP2AP05549 437 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 FDX2Q6P4F2 183 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 FAHD1Q6P587 224 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TGIF2LYQ8IUE0 185 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TGIF2LXQ8IUE1 241 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 C11orf42Q8N5U0 333 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 WDR31Q8NA23 367 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 DEFB124Q8NES8 71 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR5H6Q8NGV6 325 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 RBPMSQ93062 196 aaKnown RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR10C1Q96KK4 312 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 C10orf90Q96M02 699 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 NKX6-2Q9C056 277 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 CXXC4Q9H2H0 198 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 LHX9Q9NQ69 397 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 RASL12Q9NYN1 266 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 A0A1W2PS18 150 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 M0R296 226 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR2J3O76001 311 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 GZMHP20718 246 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR3A4PP47883 348 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 SLC38A11Q08AI6 406 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 HAGHQ16775 308 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 Q3ZCU0 254 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 CST9Q5W186 159 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 BHLHA15Q7RTS1 189 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR8I2Q8N0Y5 310 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TMEM99Q8N816 258 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 SLC25A33Q9BSK2 321 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PTDSS2Q9BVG9 487 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 SH2D2AQ9NP31 389 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 KCNE1BA0A087WTH5 132 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 BCL2L11O43521 198 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 NKX2-2O95096 273 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 B3GALT4O96024 378 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 ADRB1P08588 477 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 OR13C7P0DN81 318 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 CPN1P15169 458 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 CCL7P80098 99 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 HTRA4P83105 476 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 GAMTQ14353 236 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF260Q3ZCT1 412 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PABPC1L2AQ5JQF8 200 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 SPATA46Q5T0L3 261 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 UQCC3Q6UW78 93 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 LRRTM1Q86UE6 522 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 C20orf196Q8IYI0 205 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 LSMEM1Q8N8F7 131 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 FGF11Q92914 225 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 GMPPAQ96IJ6 420 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms