RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 HERPUD1Q15011 391 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 HCP5Q6MZN7 132 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 DEGS2Q6QHC5 323 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 ZNF679Q8IYX0 411 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 POC1AQ8NBT0 407 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 OR2T6Q8NHC8 308 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 ASB17Q8WXJ9 295 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 SDSLQ96GA7 329 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 OR8B4Q96RC9 309 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 TEAD3Q99594 435 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 PRRG3Q9BZD7 231 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 C1orf21Q9H246 121 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 MOB1AQ9H8S9 216 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 RAB18Q9NP72 206 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 PAPOLBQ9NRJ5 636 aaKnown RBP10.4□□□□□ -0.74
CD44-203ENST00000278386 GPR173Q9NS66 373 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 RASL12Q9NYN1 266 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 FBLN5Q9UBX5 448 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 OR14J1Q9UGF5 321 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 NUFIP1Q9UHK0 495 aaKnown RBP10.4□□□□□ -0.74
CD44-203ENST00000278386 SIGLEC9Q9Y336 463 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 PLXNB1O43157 2135 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 hCG_1809904A0A1W2PP81 198 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 A0A1W2PPE2 198 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 A0A1W2PR64 198 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 A0A1W2PRV1 198 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 PRR32B1ATL7 298 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 J3QT63 122 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 M0R129 80 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 SYNGR1O43759 233 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 FKBP6O75344 327 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 ZNF254O75437 659 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 FAM107AO95990 144 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 LGALS4P56470 323 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 CLVS2Q5SYC1 327 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 BCL2L15Q5TBC7 163 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 ZBTB37Q5TC79 503 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 ZNF782Q6ZMW2 699 aaPredicted RBP10.39□□□□□ -0.75
CD44-203ENST00000278386 ZNF573Q86YE8 665 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 ZNF561Q8N587 486 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 CD177Q8N6Q3 437 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 KLHDC1Q8N7A1 406 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 C11orf44Q8N8P7 122 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 OR4M1Q8NGD0 313 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 OR5K1Q8NHB7 308 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 DNAJC9Q8WXX5 260 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 ITFG2Q969R8 447 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 NKX3-1Q99801 234 aaPredicted RBP10.39□□□□□ -0.75
CD44-203ENST00000278386 HEXA-AS1Q9H8Q6 139 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 USE1Q9NZ43 259 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 DNAJB9Q9UBS3 223 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.39□□□□□ -0.75
CD44-203ENST00000278386 FOXJ3Q9UPW0 622 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 POLDIP2Q9Y2S7 368 aa10.39□□□□□ -0.75
CD44-203ENST00000278386 IGLV3-1P01715 115 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 TTRP02766 147 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 PGA5P0DJD9 388 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 PIPP12273 146 aaPredicted RBP10.38□□□□□ -0.75
CD44-203ENST00000278386 CCL3L1P16619 93 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 EFNB2P52799 333 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 CRISP1P54107 249 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 CXCR4P61073 352 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 ROM1Q03395 351 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 PLA1AQ53H76 456 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 HIST2H2BDQ6DRA6 164 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 ZNF322Q6U7Q0 402 aaPredicted RBP10.38□□□□□ -0.75
CD44-203ENST00000278386 PLEKHG7Q6ZR37 379 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 ASRGL1Q7L266 308 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 KRT74Q7RTS7 529 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 SLC35F2Q8IXU6 374 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 OR2T27Q8NH04 317 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 PPP1R35Q8TAP8 253 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 PPP1R14AQ96A00 147 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 NPFFR1Q9GZQ6 430 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 RANBP3Q9H6Z4 567 aaPredicted RBP10.38□□□□□ -0.75
CD44-203ENST00000278386 PLEKHA1Q9HB21 404 aa10.38□□□□□ -0.75
CD44-203ENST00000278386 A6NIN4 97 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 ZNF670-ZNF695F2Z2N8 137 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 GYG2O15488 501 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 PRKYO43930 277 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 VSIG10L2P0DP72 767 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 PRDX2P32119 198 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 ERVFRD-1P60508 538 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 ACTR3P61158 418 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 ZNF273Q14593 569 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 DNAL1Q4LDG9 190 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 TMEM200BQ69YZ2 307 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 C11orf88Q6PI97 169 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 LIAT1Q6ZQX7 453 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 BCDIN3DQ7Z5W3 292 aaKnown RBP10.37□□□□□ -0.75
CD44-203ENST00000278386 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
CD44-203ENST00000278386 TRMT10AQ8TBZ6 339 aaKnown RBP10.37□□□□□ -0.75
CD44-203ENST00000278386 APOL4Q9BPW4 351 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 MEGF9Q9H1U4 602 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 H2AFY2Q9P0M6 372 aaPredicted RBP10.37□□□□□ -0.75
CD44-203ENST00000278386 OR52A1Q9UKL2 312 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 R4GMQ9 66 aa10.37□□□□□ -0.75
CD44-203ENST00000278386 PQLC2LA1A4F0 135 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 H3BSH0 61 aa10.36□□□□□ -0.75
CD44-203ENST00000278386 DLGAP1O14490 977 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms