RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 GABARAPH6UMI1 98 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CYR61O00622 381 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CDC42EP2O14613 210 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CCSO14618 274 aa2.53□□□□□ -2
HERC4-201ENST00000277817 P2RX6O15547 441 aa2.53□□□□□ -2
HERC4-201ENST00000277817 DPM1O60762 260 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ICOSLGO75144 302 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR7C1O76099 320 aaPredicted RBP2.53□□□□□ -2
HERC4-201ENST00000277817 NSA2O95478 260 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 IFNA5P01569 189 aa2.53□□□□□ -2
HERC4-201ENST00000277817 C1QBP02746 253 aa2.53□□□□□ -2
HERC4-201ENST00000277817 S100A11P31949 105 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PPICP45877 212 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ZFP36L2P47974 494 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 AKR1C2P52895 323 aa2.53□□□□□ -2
HERC4-201ENST00000277817 BTG1P62324 171 aa2.53□□□□□ -2
HERC4-201ENST00000277817 MFAP5Q13361 173 aa2.53□□□□□ -2
HERC4-201ENST00000277817 RHEBQ15382 184 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ELAVL1Q15717 326 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 C14orf28Q4W4Y0 310 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ESCO2Q56NI9 601 aa2.53□□□□□ -2
HERC4-201ENST00000277817 GPR157Q5UAW9 335 aa2.53□□□□□ -2
HERC4-201ENST00000277817 C3orf33Q6P1S2 294 aa2.53□□□□□ -2
HERC4-201ENST00000277817 Q6ZS52 159 aa2.53□□□□□ -2
HERC4-201ENST00000277817 RNF165Q6ZSG1 346 aa2.53□□□□□ -2
HERC4-201ENST00000277817 MRPL21Q7Z2W9 205 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 GRINAQ7Z429 371 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ARIH2OSQ8N7S6 290 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR5T1Q8NG75 326 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR10K1Q8NGX5 313 aa2.53□□□□□ -2
HERC4-201ENST00000277817 FNDC9Q8TBE3 224 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PHYHIPQ92561 330 aa2.53□□□□□ -2
HERC4-201ENST00000277817 WDR34Q96EX3 536 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CCNL2Q96S94 520 aaPredicted RBP2.53□□□□□ -2
HERC4-201ENST00000277817 NKX3-1Q99801 234 aaPredicted RBP2.53□□□□□ -2
HERC4-201ENST00000277817 ZNF649Q9BS31 505 aa2.53□□□□□ -2
HERC4-201ENST00000277817 NICN1Q9BSH3 213 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ALKBH7Q9BT30 221 aaPredicted RBP2.53□□□□□ -2
HERC4-201ENST00000277817 ZNF416Q9BWM5 594 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TMEM59Q9BXS4 323 aa2.53□□□□□ -2
HERC4-201ENST00000277817 DNTTIP1Q9H147 329 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ISYNA1Q9NPH2 558 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SLC52A3Q9NQ40 469 aa2.53□□□□□ -2
HERC4-201ENST00000277817 MED29Q9NX70 200 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TAS2R4Q9NYW5 299 aa2.53□□□□□ -2
HERC4-201ENST00000277817 GLTPQ9NZD2 209 aa2.53□□□□□ -2
HERC4-201ENST00000277817 KCNG2Q9UJ96 466 aa2.53□□□□□ -2
HERC4-201ENST00000277817 MRPS28Q9Y2Q9 187 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 MMACHCQ9Y4U1 282 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ZFC3H1O60293 1989 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 A0A1B0GX78 115 aa2.53□□□□□ -2
HERC4-201ENST00000277817 A0A1W2PPV9 198 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SHISA7A6NL88 538 aa2.53□□□□□ -2
HERC4-201ENST00000277817 HSPB6O14558 160 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SULT1B1O43704 296 aa2.53□□□□□ -2
HERC4-201ENST00000277817 IGHV3-9P01782 118 aa2.53□□□□□ -2
HERC4-201ENST00000277817 IGHG3P01860 377 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SERPINE2P07093 398 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CALCBP10092 127 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TPT1P13693 172 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 OMGP23515 440 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ETV6P41212 452 aa2.53□□□□□ -2
HERC4-201ENST00000277817 GZMMP51124 257 aa2.53□□□□□ -2
HERC4-201ENST00000277817 P2RX1P51575 399 aa2.53□□□□□ -2
HERC4-201ENST00000277817 EFNA3P52797 238 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TAS2R31P59538 309 aa2.53□□□□□ -2
HERC4-201ENST00000277817 TAS2R20P59543 309 aa2.53□□□□□ -2
HERC4-201ENST00000277817 UBE2NP61088 152 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 B2MP61769 119 aa2.53□□□□□ -2
HERC4-201ENST00000277817 RPS18P62269 152 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 NHLH1Q02575 133 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PMPCAQ10713 525 aa2.53□□□□□ -2
HERC4-201ENST00000277817 HYAL1Q12794 435 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CDK5R1Q15078 307 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PLCXD3Q63HM9 321 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CD164L2Q6UWJ8 174 aa2.53□□□□□ -2
HERC4-201ENST00000277817 GLIPR1L1Q6UWM5 242 aa2.53□□□□□ -2
HERC4-201ENST00000277817 AAED1Q7RTV5 226 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SLC16A14Q7RTX9 510 aa2.53□□□□□ -2
HERC4-201ENST00000277817 STHQ8IWL8 128 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR2L13Q8N349 312 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SLC22A24Q8N4F4 322 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR8D4Q8NGM9 314 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR1J4Q8NGS1 313 aa2.53□□□□□ -2
HERC4-201ENST00000277817 KCNG3Q8TAE7 436 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.53□□□□□ -2
HERC4-201ENST00000277817 PIGTQ969N2 578 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ARL11Q969Q4 196 aa2.53□□□□□ -2
HERC4-201ENST00000277817 OR2A5Q96R48 311 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ARHGDIGQ99819 225 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CMSS1Q9BQ75 279 aaKnown RBP2.53□□□□□ -2
HERC4-201ENST00000277817 MED18Q9BUE0 208 aa2.53□□□□□ -2
HERC4-201ENST00000277817 HINT2Q9BX68 163 aa2.53□□□□□ -2
HERC4-201ENST00000277817 HRASLSQ9HDD0 168 aa2.53□□□□□ -2
HERC4-201ENST00000277817 CTSFQ9UBX1 484 aa2.53□□□□□ -2
HERC4-201ENST00000277817 PISDQ9UG56 409 aa2.53□□□□□ -2
HERC4-201ENST00000277817 ALPK2Q86TB3 2170 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SPTY2D1-AS1A0A0U1RR47 76 aa2.53□□□□□ -2
HERC4-201ENST00000277817 A0A1B0GTH9 108 aa2.53□□□□□ -2
HERC4-201ENST00000277817 SLC22A23A1A5C7 686 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms