RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 FARS2O95363 451 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 UBBP0CG47 229 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 UBA52P62987 128 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 RAC1P63000 192 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 ZNF529Q6P280 563 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 HDDC2Q7Z4H3 204 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 OR11L1Q8NGX0 322 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 UBALD1Q8TB05 177 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 ARPC5LQ9BPX5 153 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 CMSS1Q9BQ75 279 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 ARRDC1-AS1Q9H2J1 176 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 TCFL5Q9UL49 500 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 NBASA2RRP1 2371 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 TPPPO94811 219 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 OR2F2O95006 317 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 GSTP1P09211 210 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 PPIAP62937 165 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 PSG4Q00888 419 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 OR2F1Q13607 317 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 ZNF169Q14929 603 aaPredicted RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 PAN3Q58A45 887 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 PLCXD3Q63HM9 321 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 SUMF1Q8NBK3 374 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 NEK7Q8TDX7 302 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 SULT4A1Q9BR01 284 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 ZNF442Q9H7R0 627 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 MLF1P58340 268 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 EXT1Q16394 746 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 SULF2Q8IWU5 870 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 LRFN1Q9P244 771 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 AK3Q9UIJ7 227 aa14.49□□□□□ -0.09
VPS54-201ENST00000272322 C14orf166Q9Y224 244 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 EXPH5Q8NEV8 1989 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 MEX3AA1L020 520 aaKnown RBP14.48□□□□□ -0.09
VPS54-201ENST00000272322 FGF2P09038 288 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 OR5H8P0DN80 308 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 CPT2P23786 658 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 PTGER4P35408 488 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 NPBWR2P48146 333 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 RPL7L1Q6DKI1 246 aaKnown RBP14.48□□□□□ -0.09
VPS54-201ENST00000272322 SKA3Q8IX90 412 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 CHST5Q9GZS9 411 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 SLC26A1Q9H2B4 701 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 LOXL2Q9Y4K0 774 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 PCNX1Q96RV3 2341 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 IGLV3-32A0A0A0MS00 114 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 A8MXK9 166 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 ATP6V1G2-DDX39BF2Z307 99 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 SFT2D2O95562 160 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 ADH6P28332 368 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 DEFB123Q8N688 67 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 HAS2Q92819 552 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 MARS2Q96GW9 593 aaKnown RBP14.48□□□□□ -0.09
VPS54-201ENST00000272322 TSNAXQ99598 290 aaKnown RBP14.48□□□□□ -0.09
VPS54-201ENST00000272322 FOXB1Q99853 325 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 PRRG4Q9BZD6 226 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 SLC2A8Q9NY64 477 aa14.48□□□□□ -0.09
VPS54-201ENST00000272322 PCP4L1A6NKN8 68 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 ETV2O00321 342 aaPredicted RBP14.47□□□□□ -0.09
VPS54-201ENST00000272322 CD79AP11912 226 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 ITGA3P26006 1051 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 AKR1C3P42330 323 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 GUCA2BQ16661 112 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 SLC25A26Q70HW3 274 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 PPP1R32Q7Z5V6 425 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 MRPL24Q96A35 216 aaKnown RBP14.47□□□□□ -0.09
VPS54-201ENST00000272322 IL36RNQ9UBH0 155 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 ST3GAL6Q9Y274 331 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 A0A1W2PR80 420 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 TOR1AO14656 332 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 CYB561P49447 251 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 LSM6P62312 80 aaKnown RBP14.47□□□□□ -0.09
VPS54-201ENST00000272322 DCAF12Q5T6F0 453 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 OR1F12Q8NHA8 337 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 FNDC9Q8TBE3 224 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 CT55Q8WUE5 264 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 SPENQ96T58 3664 aaKnown RBP14.47□□□□□ -0.09
VPS54-201ENST00000272322 IGKV1-12A0A0C4DH73 117 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 NRASP01111 189 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 IL2RAP01589 272 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 IGKV1D-12P01611 117 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 CD37P11049 281 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 PIGPP57054 158 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 ATP1A1-AS1Q5TC04 95 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 RAB11FIP2Q7L804 512 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 HS3ST6Q96QI5 342 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 C12orf49Q9H741 205 aa14.47□□□□□ -0.09
VPS54-201ENST00000272322 KRBOX1C9JBD0 128 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 BET1O15155 118 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 ACTL6AO96019 429 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 ZXDAP98168 799 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 RIPPLY1Q0D2K3 151 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 ALKBH2Q6NS38 261 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 SLC22A25Q6T423 547 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 CALHM1Q8IU99 346 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 RNF138Q8WVD3 245 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 SHARPINQ9H0F6 387 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 ZNF700Q9H0M5 742 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 ATMQ13315 3056 aa14.46□□□□□ -0.09
VPS54-201ENST00000272322 LRP3O75074 770 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms