RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CHST5Q9GZS9 411 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 ESRP2Q9H6T0 727 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 OR5H8P0DN80 308 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 HIST1H1DP16402 221 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 CAV2P51636 162 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 FAM58AQ8N1B3 248 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 OR1K1Q8NGR3 316 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 C10orf35Q96D05 121 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 OR5B21A6NL26 309 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 TUSC2O75896 110 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 PLAURQ03405 335 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 PPIL3Q9H2H8 161 aaKnown RBP12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 TAAR3PQ9P1P4 343 aa12.63□□□□□ -0.39
PDLIM2-201ENST00000265810 A0A0U1RQV5 110 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 GLAP06280 429 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 DCUN1D4Q92564 292 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 TINAGL1Q9GZM7 467 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 SLC23A1Q9UHI7 598 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 ZNF230Q9UIE0 474 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 TRBV5-5A0A0J9YX44 114 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 PIN1P1O15428 100 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 RAB6AP20340 208 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 BTG1P62324 171 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 WDYHV1Q96HA8 205 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 FAM206AQ9NX38 181 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 FREM3P0C091 2139 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 ACTL6BO94805 426 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 TNFRSF1AP19438 455 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 BAMBIQ13145 260 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 PNLIPRP3Q17RR3 467 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 PIP4P1Q86T03 277 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 AQP7O14520 342 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 HSD17B6O14756 317 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 PHF1O43189 567 aaPredicted RBP12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 SIX6O95475 246 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 CTSSP25774 331 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 FCGR2CP31995 323 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 ERVK-16P61578 105 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 SNAI3Q3KNW1 292 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 MTFP1Q9UDX5 166 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 POLEQ07864 2286 aa12.62□□□□□ -0.39
PDLIM2-201ENST00000265810 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 MEX3AA1L020 520 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 CDIPTO14735 213 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 SPNP16150 400 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 MRPL13Q9BYD1 178 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 MFFQ9GZY8 342 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 WNT5BQ9H1J7 359 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 MSL2Q9HCI7 577 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 CSAG2Q9Y5P2 127 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 V9GYH0 126 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 LINC00303Q3SY05 128 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 UBALD1Q8TB05 177 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 MARCH1Q8TCQ1 289 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 ABHD5Q8WTS1 349 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 FAM234AQ9H0X4 552 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 FN3KRPQ9HA64 309 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 G6PC2Q9NQR9 355 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 MAB21L2Q9Y586 359 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 HEATR5AQ86XA9 2040 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 TEX46H3BTG2 121 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 SOCS1O15524 211 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 ADRA2AP08913 450 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 CTXN2P0C2S0 81 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 VSIG8P0DPA2 414 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 EFNB2P52799 333 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 PHYHD1Q5SRE7 291 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 Q8IYB0 196 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 ITPKCQ96DU7 683 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 TIMD4Q96H15 378 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 SNAPC5O75971 98 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 UBE2MP61081 183 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 RAP2BP61225 183 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 SORDQ00796 357 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 CATR1Q13166 79 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 ENDOGQ14249 297 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 C1orf123Q9NWV4 160 aa12.61□□□□□ -0.39
PDLIM2-201ENST00000265810 CD3EP07766 207 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 TNFAIP6P98066 277 aaPredicted RBP12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 SCCPDHQ8NBX0 429 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 DEDD2Q8WXF8 326 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 TMEM45BQ96B21 275 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 BORCS7-ASMTA0A0B4J1R7 106 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 FABP7O15540 132 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 RPA2P15927 270 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 EFNB1P98172 346 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 LRRTM1Q86UE6 522 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 OR51H1Q8NH63 302 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 ZFP57Q9NU63 452 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 PCNX1Q96RV3 2341 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 ISG15P05161 165 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 UCP2P55851 309 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 GVQW1Q8N7I0 195 aa12.6□□□□□ -0.39
PDLIM2-201ENST00000265810 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
PDLIM2-201ENST00000265810 TBPP20226 339 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms