RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 NUPR1O60356 82 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 DFFBO76075 338 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 NDUFB2O95178 105 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 CSNK2A2P19784 350 aaPredicted RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 BCL6P41182 706 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 CLDN17P56750 224 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 SCAND1P57086 179 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 ICAM4Q14773 271 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 IAH1Q2TAA2 248 aaPredicted RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 SLC48A1Q6P1K1 146 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 CDC20BQ86Y33 519 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 COMMD1Q8N668 190 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 ZFP62Q8NB50 900 aaPredicted RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 RCBTB1Q8NDN9 531 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 OR13D1Q8NGV5 346 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 CDC6Q99741 560 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 AIF1LQ9BQI0 150 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 ARV1Q9H2C2 271 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 SERINC1Q9NRX5 453 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 GRHPRQ9UBQ7 328 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 KNTC1P50748 2209 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 KIR2DL5BA0A0G2JN68 375 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 KIR2DL5BA0A0G2JPC4 375 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 A0A1W2PQF6 199 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 HSPA12AO43301 675 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 LCATP04180 440 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 CD82P27701 267 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 CSNK1G2P78368 415 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 REEP5Q00765 189 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 DMRTC1Q5HYR2 192 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 C1orf194Q5T5A4 169 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 SLC22A25Q6T423 547 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 ADGRE4PQ86SQ3 457 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 MARCH3Q86UD3 253 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 KIR2DL5AQ8N109 375 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 NECAP1Q8NC96 275 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 OR10A7Q8NGE5 316 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 OR2L8Q8NGY9 312 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 ASB5Q8WWX0 329 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 REEP6Q96HR9 211 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 PARD6AQ9NPB6 346 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 GAB2Q9UQC2 676 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 PTPRZ1P23471 2315 aaPredicted RBP7.73□□□□□ -1.17
VAPB-201ENST00000265619 A0A0A6YYH2 397 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 A6NJ64 397 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 K7N7A8 449 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 NDUFS8O00217 210 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 DEDDO75618 318 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 NDUFB8O95169 186 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 AHSA1O95433 338 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 SCGB1D1O95968 90 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 GAPDHP04406 335 aaKnown RBP7.73□□□□□ -1.17
VAPB-201ENST00000265619 IFNA6P05013 189 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 GZMHP20718 246 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 EPHA1P21709 976 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 POLR2HP52434 150 aaKnown RBP7.73□□□□□ -1.17
VAPB-201ENST00000265619 ARHGAP11BQ3KRB8 267 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 ALG10BQ5I7T1 473 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 RNF44Q7L0R7 432 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 SLC16A9Q7RTY1 509 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 EXD3Q8N9H8 876 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 OR2L2Q8NH16 312 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 OR4K15Q8NH41 348 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 MRPL24Q96A35 216 aaKnown RBP7.73□□□□□ -1.17
VAPB-201ENST00000265619 PRRX2Q99811 253 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 COMMD4Q9H0A8 199 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 FREM3P0C091 2139 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 YLPM1P49750 1951 aaKnown RBP7.73□□□□□ -1.17
VAPB-201ENST00000265619 CFAP54Q96N23 3096 aa7.73□□□□□ -1.17
VAPB-201ENST00000265619 FTCDNL1E5RQL4 147 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 RAD51DO75771 328 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 EML2O95834 649 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 KNG1P01042 644 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 CST2P09228 141 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 HNF1AP20823 631 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 HIST1H1TP22492 207 aaPredicted RBP7.72□□□□□ -1.17
VAPB-201ENST00000265619 HNF4GQ14541 408 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 OR13G1Q8NGZ3 307 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 MS4A6EQ96DS6 147 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 SPACA5Q96QH8 159 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 APOOQ9BUR5 198 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 GPR173Q9NS66 373 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 A0A0A6YYD4 124 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 B4DGG1 531 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 ZNF205O95201 554 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 HPRT1P00492 218 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 GCGP01275 180 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 TACSTD2P09758 323 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 GLI4P10075 376 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 CTSEP14091 401 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 CPMP14384 443 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 PTGER4P35408 488 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 ACAA2P42765 397 aaKnown RBP7.72□□□□□ -1.17
VAPB-201ENST00000265619 TLE1Q04724 770 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 DCST2Q5T1A1 773 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 TMEFF1Q8IYR6 380 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 TSTD1Q8NFU3 115 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 OR1E3Q8WZA6 343 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 TVP23CQ96ET8 276 aa7.72□□□□□ -1.17
VAPB-201ENST00000265619 MSL2Q9HCI7 577 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms