RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 PNLIPP16233 465 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 YPEL5P62699 121 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 H3F3AP84243 136 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 COTL1Q14019 142 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 KIR2DS5Q14953 304 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 PLXDC2Q6UX71 529 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 SGPP2Q8IWX5 399 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 TSACCQ96A04 125 aaPredicted RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 RIMS4Q9H426 269 aaPredicted RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 OR52A1Q9UKL2 312 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 TCFL5Q9UL49 500 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 HEATR5AQ86XA9 2040 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 PRSS37A4D1T9 235 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 E5RGE8 158 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 BPNT1O95861 308 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 KNG1P01042 644 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 BGLAPP02818 100 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 OR5AC1P0C628 307 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 CCR4P51679 360 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 RPL27P61353 136 aaKnown RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 MRPS21P82921 87 aaKnown RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 QRFPP83859 136 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 INSM1Q01101 510 aaPredicted RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 GLO1Q04760 184 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 AADACL3Q5VUY0 350 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 C1QL3Q5VWW1 255 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 ARMC6Q6NXE6 501 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 HLA-CQ95604 372 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 KTI12Q96EK9 354 aaPredicted RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 PHF7Q9BWX1 381 aaPredicted RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 DKKL1Q9UK85 242 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 MRPS18CQ9Y3D5 142 aaKnown RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 R4GMQ9 66 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 LOC107986453A0A1B0GWG9 222 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 TGFBR3LH3BV60 316 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 HRKO00198 91 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 IFNA21P01568 189 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 IGHMP01871 453 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 RPLP1P05386 114 aaKnown RBP11.55□□□□□ -0.56
NUP54-201ENST00000264883 HNRNPA2B1P22626 353 aaKnown RBP11.55□□□□□ -0.56
NUP54-201ENST00000264883 ERVFC1-1P60608 527 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 RAB35Q15286 201 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 SGCBQ16585 318 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 PRTGQ2VWP7 1150 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 SLC35E3Q7Z769 313 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 LHFPL1Q86WI0 220 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 CYB561D1Q8N8Q1 229 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 OR1P1Q8NH06 330 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 TAAR8Q969N4 342 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 C8orf44Q96CB5 159 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 NICN1Q9BSH3 213 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 ANAPC10Q9UM13 185 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 OSGIN2Q9Y236 505 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 LRP12Q9Y561 859 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 GPR137BO60478 399 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 TK1P04183 234 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 OR4A8P0C604 315 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 FUT3P21217 361 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 MSX1P28360 303 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 PTGER4P35408 488 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 TSPAN7P41732 249 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 OR3A2P47893 321 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 EMP2P54851 167 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 BTG2P78543 158 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 MRPS11P82912 194 aaKnown RBP11.55□□□□□ -0.56
NUP54-201ENST00000264883 ZNF117Q03924 483 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 CD226Q15762 336 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 KIF26BQ2KJY2 2108 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 COX15Q7KZN9 410 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 MARCH3Q86UD3 253 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 SHISA5Q8N114 240 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 OR52N5Q8NH56 324 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 ZNF519Q8TB69 540 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 RHBDD1Q8TEB9 315 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 B3GALT5Q9Y2C3 310 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
NUP54-201ENST00000264883 LIPGQ9Y5X9 500 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 TRIOO75962 3097 aa11.55□□□□□ -0.56
NUP54-201ENST00000264883 A6NIZ1 184 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 A6NNC1 897 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 B4DEV8 164 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 SDCBPO00560 298 aaPredicted RBP11.54□□□□□ -0.56
NUP54-201ENST00000264883 NSA2O95478 260 aaKnown RBP11.54□□□□□ -0.56
NUP54-201ENST00000264883 PGA3P0DJD8 388 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 AMY2BP19961 511 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 MMP16P51512 607 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 RAP1BP61224 184 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 NNATQ16517 81 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 EMG1Q92979 244 aaKnown RBP11.54□□□□□ -0.56
NUP54-201ENST00000264883 SYT3Q9BQG1 590 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 C14orf166Q9Y224 244 aaKnown RBP11.54□□□□□ -0.56
NUP54-201ENST00000264883 EMC9Q9Y3B6 208 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 WSB1Q9Y6I7 421 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 IGLV1-36A0A0B4J1U3 117 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 UTS2O95399 124 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 GSTP1P09211 210 aaKnown RBP11.54□□□□□ -0.56
NUP54-201ENST00000264883 EPHA1P21709 976 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms