RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 FBXL17Q9UF56 701 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 MTCH2Q9Y6C9 303 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 HLA-GP17693 338 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 TGIF1Q15583 401 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 UBE2V2Q15819 145 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 OR5L1Q8NGL2 311 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 ISOC2Q96AB3 205 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 MRPL13Q9BYD1 178 aaKnown RBP11.11□□□□□ -0.63
LIG1-201ENST00000263274 SLC26A1Q9H2B4 701 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 UCK1Q9HA47 277 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 C1orf123Q9NWV4 160 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 PCDHGA1Q9Y5H4 931 aa11.11□□□□□ -0.63
LIG1-201ENST00000263274 PI4KAP42356 2102 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 C1orf196B1AJZ1 125 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 SFTPCP11686 197 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 SPINK2P20155 84 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 CCNOP22674 350 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 CPT2P23786 658 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 CYB5R2Q6BCY4 276 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 GUSBP11Q6P575 273 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 LYPD6Q86Y78 171 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 SUMF1Q8NBK3 374 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 NRIP2Q9BQI9 281 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 ULBP2Q9BZM5 246 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 KCNIP3Q9Y2W7 256 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 CACNA1EQ15878 2313 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 H3BMH7 237 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 M0R135 149 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 F10P00742 488 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 OR5H8P0DN80 308 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 OMGP23515 440 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 PTGER4P35408 488 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 TMEM33P57088 247 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 EIF2S3LQ2VIR3 472 aaKnown RBP11.1□□□□□ -0.63
LIG1-201ENST00000263274 WDSUB1Q8N9V3 476 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 EMG1Q92979 244 aaKnown RBP11.1□□□□□ -0.63
LIG1-201ENST00000263274 ZNF799Q96GE5 643 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 ZNF581Q9P0T4 197 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 PADI1Q9ULC6 663 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 DOCK7Q96N67 2140 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 MFNGO00587 321 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 C1QL1O75973 258 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 NXPH3O95157 252 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 S100A8P05109 93 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 OR8U9P0C7N5 309 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 ZNF14P17017 642 aaPredicted RBP11.1□□□□□ -0.63
LIG1-201ENST00000263274 ZNF17P17021 662 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 CAMLGP49069 296 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 PIGPP57054 158 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 FABP9Q0Z7S8 132 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 FAM189A2Q15884 450 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 AADACL3Q5VUY0 350 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 RHBDD2Q6NTF9 364 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 GJC3Q8NFK1 279 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 OR8U1Q8NH10 309 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 RGCCQ9H4X1 137 aa11.1□□□□□ -0.63
LIG1-201ENST00000263274 MCTS1Q9ULC4 181 aaKnown RBP11.1□□□□□ -0.63
LIG1-201ENST00000263274 WRBO00258 174 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 MSR1P21757 451 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 FHITP49789 147 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 DEFA6Q01524 100 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 ECH1Q13011 328 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 SPIN3Q5JUX0 258 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 VAX1Q5SQQ9 334 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 GGNBP1Q5YKI7 109 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 STX12Q86Y82 276 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 OR14K1Q8NGZ2 314 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 RASL10BQ96S79 203 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 MOB1AQ9H8S9 216 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 DKKL1Q9UK85 242 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 TMEM131Q92545 1883 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 PRRC2CQ9Y520 2896 aaKnown RBP11.09□□□□□ -0.63
LIG1-201ENST00000263274 FGF16O43320 207 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 GATCO43716 136 aaKnown RBP11.09□□□□□ -0.63
LIG1-201ENST00000263274 IGLV3-19P01714 112 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 IGHV3-9P01782 118 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
LIG1-201ENST00000263274 SRSF4Q08170 494 aaKnown RBP11.09□□□□□ -0.63
LIG1-201ENST00000263274 CLINT1Q14677 625 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 ZNF837Q96EG3 531 aaPredicted RBP11.09□□□□□ -0.63
LIG1-201ENST00000263274 PIGQQ9BRB3 760 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 FBXO7Q9Y3I1 522 aa11.09□□□□□ -0.63
LIG1-201ENST00000263274 DBX1A6NMT0 343 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 GRB2P62993 217 aaKnown RBP11.08□□□□□ -0.64
LIG1-201ENST00000263274 PNLIPRP3Q17RR3 467 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 SLC25A47Q6Q0C1 308 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 NEK7Q8TDX7 302 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 MR1Q95460 341 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 C1orf147Q96MC9 270 aaPredicted RBP11.08□□□□□ -0.64
LIG1-201ENST00000263274 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 NUP210LQ5VU65 1888 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 LRP4O75096 1905 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 F8VVB4 439 aa11.08□□□□□ -0.64
LIG1-201ENST00000263274 F8VWA3 439 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms