RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DIDO1Q9BTC0 2240 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 BOD1L1Q8NFC6 3051 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 CFAP47Q6ZTR5 3102 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 MEX3AA1L020 520 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 LINC01387J3KSC0 135 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 M0R135 149 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 SNAPINO95295 136 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 PRH1P02810 166 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 LCATP04180 440 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 OR5H8P0DN80 308 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 CPT2P23786 658 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 PEA15Q15121 130 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 RSU1Q15404 277 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 SWI5Q1ZZU3 235 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 RAB11FIP2Q7L804 512 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 YRDCQ86U90 279 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 PPP1R3BQ86XI6 285 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 OR5L2Q8NGL0 311 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 SPACA9Q96E40 222 aaPredicted RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 ZNF799Q96GE5 643 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 MARS2Q96GW9 593 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 SPSB2Q99619 263 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 OCSTAMPQ9BR26 566 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 GEMIN2O14893 280 aaKnown RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 OR5AC1P0C628 307 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 B4GALT1P15291 398 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 SHEQ5VZ18 495 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 UQCC3Q6UW78 93 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 PEG10Q86TG7 708 aaKnown RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 OR6X1Q8NH79 312 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 OIT3Q8WWZ8 545 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 SHDQ96IW2 340 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 IP6K3Q96PC2 410 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 RAB33BQ9H082 229 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 RCC2Q9P258 522 aaKnown RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 AK3Q9UIJ7 227 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 PADI1Q9ULC6 663 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 R4GN57 208 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ATXN7O15265 892 aaPredicted RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 NDUFA2O43678 99 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 TLX3O43711 291 aaPredicted RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 ARG1P05089 322 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 SRFP11831 508 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 MSR1P21757 451 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 NHLH2Q02577 135 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ECH1Q13011 328 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 CLINT1Q14677 625 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ABCA11PQ4W5N1 156 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ZNF468Q5VIY5 522 aaPredicted RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 RBMS3Q6XE24 437 aaKnown RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 SLC16A13Q7RTY0 426 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 SGPP2Q8IWX5 399 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 CD300LFQ8TDQ1 290 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ADAMTS17Q8TE56 1095 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 SLC25A43Q8WUT9 341 aaPredicted RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 CCDC74BQ96LY2 380 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ULBP2Q9BZM5 246 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 TMEM100Q9NV29 134 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 NDRG3Q9UGV2 375 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 FBXO7Q9Y3I1 522 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 FREM1Q5H8C1 2179 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 IGKV1-27A0A075B6S5 117 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 A0A1W2PNV4 684 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 OR13C7P0DN81 318 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 CCL2P13500 99 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 TBPP20226 339 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 RFC3P40938 356 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 CAV2P51636 162 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 HGFACQ04756 655 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ENDOGQ14249 297 aaKnown RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 SMCO1Q147U7 214 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 MIDNQ504T8 468 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 LHFPL1Q86WI0 220 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 OR52M1Q8NGK5 317 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 SGK3Q96BR1 496 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 NAA11Q9BSU3 229 aaPredicted RBP7.97□□□□□ -1.13
MSH4-201ENST00000263187 CNTNAP3Q9BZ76 1288 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 MAGT1Q9H0U3 335 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ZFP57Q9NU63 452 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 ADAMTS9Q9P2N4 1935 aa7.97□□□□□ -1.13
MSH4-201ENST00000263187 LAMA5O15230 3695 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 TRBV6-7A0A0A0MS04 114 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 IGHV5-10-1A0A0J9YXX1 117 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 DHRS3O75911 302 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 SCGNO76038 276 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 MPZP25189 248 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 NTF4P34130 210 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 TAS2R46P59540 309 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 ZNF528Q3MIS6 628 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 SLC22A25Q6T423 547 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 TMEM156Q8N614 296 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 GJC3Q8NFK1 279 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 MR1Q95460 341 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 SLAMF9Q96A28 289 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 CRLF2Q9HC73 371 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 PARPBPQ9NWS1 579 aa7.96□□□□□ -1.13
MSH4-201ENST00000263187 PTRH2Q9Y3E5 179 aaKnown RBP7.96□□□□□ -1.13
MSH4-201ENST00000263187 A0A0G2JMM0 328 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 hCG_1809904A0A1W2PP81 198 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 A0A1W2PPB8 328 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms