RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 OR10A2Q9H208 303 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 URGCP-MRPS24S4R325 110 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 A0A087WWC5 75 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 OR5H15A6NDH6 313 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 OR5H1A6NKK0 313 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 ZNF878C9JN71 531 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 MKRN2OSH3BPM6 223 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 TNFRSF10CO14798 259 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 MBPP02686 304 aaPredicted RBP13.18□□□□□ -0.3
XRCC1-201ENST00000262887 APOBEC1P41238 236 aaKnown RBP13.18□□□□□ -0.3
XRCC1-201ENST00000262887 UBE2KP61086 200 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 HSD11B2P80365 405 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 TNFRSF9Q07011 255 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 HIST2H3PS2Q5TEC6 136 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 TMEM182Q6ZP80 229 aaPredicted RBP13.18□□□□□ -0.3
XRCC1-201ENST00000262887 WDFY1Q8IWB7 410 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 OR51T1Q8NGJ9 327 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 SMOC1Q9H4F8 434 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 EDN3P14138 238 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 YAF2Q8IY57 180 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 HPSE2Q8WWQ2 592 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 C11orf40Q8WZ69 217 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 DAZLQ92904 295 aaKnown RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 ZNF701Q9NV72 531 aaPredicted RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 MED29Q9NX70 200 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 RBFOX3A6NFN3 312 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 TLCD2A6NGC4 264 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 CYB5BO43169 146 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 PTBP3O95758 552 aaKnown RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 FABP4P15090 132 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 GALNSP34059 522 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 ERVFRD-1P60508 538 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 POU3F1Q03052 451 aaPredicted RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 GPR157Q5UAW9 335 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 APCDD1LQ8NCL9 501 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 C5orf34Q96MH7 638 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 KCNK17Q96T54 332 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 CDCA3Q99618 268 aaPredicted RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 TGIF2-C20orf24A0A0A6YYL0 155 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 METTL12A8MUP2 240 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 ALG1L2C9J202 215 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 TRGC2P03986 189 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 TMEM196Q5HYL7 178 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 GRINAQ7Z429 371 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 OR10S1Q8NGN2 331 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 GPR119Q8TDV5 335 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 RAB24Q969Q5 203 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 FAM71F1Q96KD3 344 aaPredicted RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 ZNF2Q9BSG1 426 aaPredicted RBP13.17□□□□□ -0.3
XRCC1-201ENST00000262887 HS3ST3B1Q9Y662 390 aa13.17□□□□□ -0.3
XRCC1-201ENST00000262887 CRYM-AS1A6NIL9 109 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 MS4A18H0YCH9 400 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 K7N7A8 449 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 XRCC2O43543 280 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 CELA2BP08218 269 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 EN2P19622 333 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 HNRNPA2B1P22626 353 aaKnown RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 ECI1P42126 302 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 KIR2DL1P43626 348 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 CEBPGP53567 150 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 MS4A18Q3C1V0 323 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 OR2T2Q6IF00 324 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 OR13D1Q8NGV5 346 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 ADIPOR1Q96A54 375 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 ADAM10O14672 748 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 HPNP05981 417 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 CTSDP07339 412 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 BLVRBP30043 206 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-201ENST00000262887 DLK1P80370 383 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 HHEXQ03014 270 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 DMRTC1Q5HYR2 192 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 OR5D18Q8NGL1 313 aa13.16□□□□□ -0.3
XRCC1-201ENST00000262887 HSD17B6O14756 317 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 DIRAS3O95661 229 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 CCL20P78556 96 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 PLCXD2Q0VAA5 305 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 ZNF542PQ5EBM4 170 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 POM121Q96HA1 1249 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 SIRT7Q9NRC8 400 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 OBP2AQ9NY56 170 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 KIR2DS5A0A0G2JLQ3 304 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 A0A0G2JNG1 304 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 FTCDNL1E5RQL4 147 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 H0YIG0 161 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 H0YL77 283 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 KIR2DS3K7RE56 304 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 POU2F2P09086 479 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 KLK2P20151 261 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 BPIFB3P59826 476 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 KIR2DS5Q14953 304 aa13.15□□□□□ -0.3
XRCC1-201ENST00000262887 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms