RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 NMES1Q9C002 83 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 CHST11Q9NPF2 352 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 FSCN3Q9NQT6 498 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 RHPN2P1A8MT19 583 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 TIAF1O95411 115 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 IGHV3-9P01782 118 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 SRFP11831 508 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 RABIFP47224 123 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 UNQ6494/PRO21346Q6UXR6 183 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 SULF2Q8IWU5 870 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 NKAIN3Q8N8D7 197 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 MFSD8Q8NHS3 518 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 S100A13Q99584 98 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 RBM24Q9BX46 236 aaKnown RBP11.39□□□□□ -0.59
SNX1-201ENST00000261889 ZMAT5Q9UDW3 170 aaKnown RBP11.39□□□□□ -0.59
SNX1-201ENST00000261889 GVINP1Q7Z2Y8 2422 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 H0YL77 283 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 TNFRSF10CO14798 259 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 BPNT1O95861 308 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 MELTFP08582 738 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 RPS2P15880 293 aaKnown RBP11.39□□□□□ -0.59
SNX1-201ENST00000261889 CFHR1Q03591 330 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 PIGYQ3MUY2 71 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 ZNF285Q96NJ3 590 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 B3GALT5Q9Y2C3 310 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 MBPP02686 304 aaPredicted RBP11.38□□□□□ -0.59
SNX1-201ENST00000261889 SULT1A1P50225 295 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 SCAND1P57086 179 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 OR6S1Q8NH40 331 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 C8orf33Q9H7E9 229 aaPredicted RBP11.38□□□□□ -0.59
SNX1-201ENST00000261889 B3GAT1Q9P2W7 334 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
SNX1-201ENST00000261889 LOC390937A0A1W2PQ73 354 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 FAM24AA6NFZ4 105 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 RNF224P0DH78 156 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 SLC6A8P48029 635 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 MMP16P51512 607 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 CLDN17P56750 224 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 GABREP78334 506 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 LYZL4Q96KX0 146 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 UCN2Q96RP3 112 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 PIGQQ9BRB3 760 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 PIGLQ9Y2B2 252 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 WIF1Q9Y5W5 379 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 ATMQ13315 3056 aa11.38□□□□□ -0.59
SNX1-201ENST00000261889 TRBV11-1A0A0K0K1C0 115 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 C5orf52A6NGY3 159 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 KLK3P07288 261 aaPredicted RBP11.37□□□□□ -0.59
SNX1-201ENST00000261889 RNF4P78317 190 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 SSBP1Q04837 148 aaKnown RBP11.37□□□□□ -0.59
SNX1-201ENST00000261889 PHYHD1Q5SRE7 291 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 C9orf135Q5VTT2 229 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 BTNL8Q6UX41 500 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 PRRX2Q99811 253 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 CXorf65A6NEN9 183 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 OR2J2O76002 312 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 MT-ATP6P00846 226 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 IFNA2P01563 188 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 RAB5AP20339 215 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 DUSP1P28562 367 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 ECH1Q13011 328 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 NELFAQ9H3P2 528 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 MFNGO00587 321 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 SNAI3Q3KNW1 292 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 KCNG3Q8TAE7 436 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 SLC22A8Q8TCC7 542 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 OCSTAMPQ9BR26 566 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 PECRQ9BY49 303 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 METTL7AQ9H8H3 244 aa11.37□□□□□ -0.59
SNX1-201ENST00000261889 STARD6P59095 220 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 SRSF4Q08170 494 aaKnown RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 UEVLDQ8IX04 471 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 PFDN5Q99471 154 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 TGIF2Q9GZN2 237 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 ZNF160Q9HCG1 818 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 RAB18Q9NP72 206 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 A0A1B0GTQ1 180 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 VSTM2BA6NLU5 285 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 CD5P06127 495 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 OR5H8P0DN80 308 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 FPR2P25090 351 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 EIF1P41567 113 aaKnown RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 KIAA0141Q14154 515 aaPredicted RBP11.36□□□□□ -0.59
SNX1-201ENST00000261889 ZNF674Q2M3X9 581 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 PHF19Q5T6S3 580 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 IL34Q6ZMJ4 242 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 HIST2H3AQ71DI3 136 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 TMEM123Q8N131 208 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 NAT6Q93015 286 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 AQP10Q96PS8 301 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 FGF21Q9NSA1 209 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 ZDHHC8Q9ULC8 765 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 KMT2EQ8IZD2 1858 aa11.36□□□□□ -0.59
SNX1-201ENST00000261889 TNRC6BQ9UPQ9 1833 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms