RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PNLIPRP3Q17RR3 467 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 TCTN1Q2MV58 587 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 RNF212Q495C1 297 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SLC35E4Q6ICL7 350 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 HSPB2A8KAH6 182 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 TSPAN12O95859 305 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 HRASP01112 189 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SDHBP21912 280 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 CSF2RBP32927 897 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SLC38A11Q08AI6 406 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 HSPB2Q16082 182 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 GPR137Q96N19 417 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 KCNE3Q9Y6H6 103 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 LINC01565O15544 149 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 ADAM11O75078 769 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 EPXP11678 715 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 CCL2P13500 99 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 ZNF141Q15928 474 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 OR2A2Q6IF42 318 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 FBXL6Q8N531 539 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SERPINE3A8MV23 424 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 C3orf80F5H4A9 247 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 FCN1O00602 326 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 ETHE1O95571 254 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SP1P08047 785 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 FUT3P21217 361 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 CCDC190Q86UF4 302 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 OR10D4PQ8NGN7 298 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SPACA9Q96E40 222 aaPredicted RBP12.79□□□□□ -0.36
CUX2-201ENST00000261726 ZNF831Q5JPB2 1677 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 A0A1W2PPC4 97 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 CSN3P07498 182 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
CUX2-201ENST00000261726 GUK1Q16774 197 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 C11orf87Q6NUJ2 197 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 FDX2Q6P4F2 183 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 U3KQ87 197 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
CUX2-201ENST00000261726 CD1BP29016 333 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SLC6A12P48065 614 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 SPCS3P61009 180 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 RSPO2Q6UXX9 243 aaPredicted RBP12.79□□□□□ -0.36
CUX2-201ENST00000261726 ZNF680Q8NEM1 530 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 GPR87Q9BY21 358 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 OR2D2Q9H210 308 aa12.79□□□□□ -0.36
CUX2-201ENST00000261726 FGF2P09038 288 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 FAM87AP0C7U9 286 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 SPNP16150 400 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 CHRNA7P36544 502 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 SMAD4Q13485 552 aaKnown RBP12.78□□□□□ -0.36
CUX2-201ENST00000261726 ZNF683Q8IZ20 524 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 ANKRD53Q8N9V6 530 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 TMEM116Q8NCL8 245 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 IL36GQ9NZH8 169 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 K7EQS6 105 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 K7ESF4 209 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 SRFP11831 508 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 KCNJ3P48549 501 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 SULT1A1P50225 295 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 GNG3P63215 75 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 KMT5CQ86Y97 462 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 PRO1933Q9H354 126 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 SEBOXQ9HB31 216 aaPredicted RBP12.78□□□□□ -0.36
CUX2-201ENST00000261726 H3BVH4 76 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 IQCJQ1A5X6 159 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 RTN4RL1Q86UN2 441 aaPredicted RBP12.78□□□□□ -0.36
CUX2-201ENST00000261726 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 G6PCP35575 357 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 PMS2P11Q13670 270 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 HLA-BQ31612 363 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 SPNS2Q8IVW8 549 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 COA4Q9NYJ1 87 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 FOXJ3Q9UPW0 622 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 C2CD4DB7Z1M9 353 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 SPINK2P20155 84 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 CEBPDP49716 269 aaPredicted RBP12.78□□□□□ -0.36
CUX2-201ENST00000261726 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
CUX2-201ENST00000261726 PTHLHP12272 177 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 MZB1Q8WU39 189 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 IL22RA2Q969J5 263 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 GNRHR2Q96P88 292 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 ZNF737O75373 536 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 PRSS1P07477 247 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 PPOXP50336 477 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 GSX1Q9H4S2 264 aaPredicted RBP12.77□□□□□ -0.36
CUX2-201ENST00000261726 DLEC1Q9Y238 1755 aa12.77□□□□□ -0.36
CUX2-201ENST00000261726 TNXAQ16473 311 aa12.77□□□□□ -0.37
CUX2-201ENST00000261726 MVB12AQ96EY5 273 aa12.77□□□□□ -0.37
CUX2-201ENST00000261726 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
CUX2-201ENST00000261726 RBPMS2Q6ZRY4 209 aaKnown RBP12.77□□□□□ -0.37
CUX2-201ENST00000261726 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.37
CUX2-201ENST00000261726 LYZL6O75951 148 aa12.77□□□□□ -0.37
CUX2-201ENST00000261726 FMODQ06828 376 aa12.77□□□□□ -0.37
CUX2-201ENST00000261726 TMEM240Q5SV17 173 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms