RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 J3QT63 122 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 ANGPTL7O43827 346 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 MPZP25189 248 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PDZK1IP1Q13113 114 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 C1orf100Q5SVJ3 147 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 SLC25A26Q70HW3 274 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 C1QL2Q7Z5L3 287 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 TNFAIP8L1Q8WVP5 186 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 NEU4Q8WWR8 484 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 FOXRED1Q96CU9 486 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 CPNE2Q96FN4 548 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 UQCC2Q9BRT2 126 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PKIBQ9C010 78 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 C1orf123Q9NWV4 160 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PPP1R3CQ9UQK1 317 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 IGKV1-12A0A0C4DH73 117 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 IFITM5A6NNB3 132 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 CDC14BO60729 498 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PFDN1O60925 122 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 IGKV1D-12P01611 117 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PTGFRP43088 359 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PSMD7P51665 324 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 HOXA4Q00056 320 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 IL24Q13007 206 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 HES5Q5TA89 166 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 FAM166AQ6J272 317 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 SFXN4Q6P4A7 337 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 WDR82Q6UXN9 313 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PNLDC1Q8NA58 520 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 ERGIC1Q969X5 290 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 SLC25A46Q96AG3 418 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 FN3KRPQ9HA64 309 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 PLGRKTQ9HBL7 147 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 ZNF701Q9NV72 531 aaPredicted RBP13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 DCAF16Q9NXF7 216 aa13.34□□□□□ -0.27
CCDC90B-201ENST00000260054 IGHV1-69-2A0A0G2JMI3 117 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 C3orf80F5H4A9 247 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 LYNX1G3V0Z9 82 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 AIPO00170 330 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 SLC17A2O00624 439 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 IGHV4-39P01824 125 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 TMEM225BP0DP42 221 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 LYNX1P0DP58 116 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 SLC2A2P11168 524 aaPredicted RBP13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 HTR2CP28335 458 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 CLDN12P56749 244 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 Q8TCH9 128 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 YIPF5Q969M3 257 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 SLC25A28Q96A46 364 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 BARHL1Q9BZE3 327 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 MTCH1Q9NZJ7 389 aa13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 MRPS28Q9Y2Q9 187 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-201ENST00000260054 hCG_1807616A0A1W2PRN6 198 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 AKR7A2O43488 359 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 COL8A2P25067 703 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 CFPP27918 469 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 EFNA4P52798 201 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 RIN1Q13671 783 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 BATF2Q8N1L9 274 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 OR6M1Q8NGM8 313 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 OR51F2Q8NH61 342 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 DYNC2LI1Q8TCX1 351 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 CCL17Q92583 94 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 SLAMF9Q96A28 289 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 C1orf147Q96MC9 270 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 ZNF488Q96MN9 340 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 DAPK2Q9UIK4 370 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 POLDIP2Q9Y2S7 368 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 DYSFO75923 2080 aa13.32□□□□□ -0.28
CCDC90B-201ENST00000260054 BAHCC1Q9P281 2608 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 A0A0B4J203 849 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 F8VVB4 439 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 F8VWA3 439 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 DAOP14920 347 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 CFHR2P36980 270 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 P2RY14Q15391 338 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 RAB11BQ15907 218 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 AWAT2Q6E213 333 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 GLIPR1L1Q6UWM5 242 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 MKXQ8IYA7 352 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 GCSAMQ8N6F7 178 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 PXT1Q8NFP0 134 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 LRRC29Q8WV35 223 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 LURAP1Q96LR2 239 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 SMURF1Q9HCE7 757 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 STEAP1Q9UHE8 339 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 RP2O75695 350 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 CYB5R3P00387 301 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 PGA5P0DJD9 388 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 PAX1P15863 534 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 ZNF182P17025 639 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 EGR1P18146 543 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 NPBWR2P48146 333 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 PTH2RP49190 550 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 ZNF181Q2M3W8 571 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms