RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 IRF3Q14653 427 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 SYPL1Q16563 259 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 LEG1Q6P5S2 330 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 PRSS54Q6PEW0 395 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM136Q6ZRR5 245 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 LINC00696Q6ZRV3 163 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 C6orf201Q7Z4U5 140 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC25A19Q9HC21 320 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 RLIMQ9NVW2 624 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 NAT8BQ9UHF3 227 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 INSL6Q9Y581 213 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 DLEC1Q9Y238 1755 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 A0A087WWC5 75 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 IGHV1-69-2A0A0G2JMI3 117 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 CFIP05156 583 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 RPS4Y1P22090 263 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 TAS2R46P59540 309 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 PMVKQ15126 192 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 RAB6CQ53S08 254 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC18B1Q6NT16 456 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 HEPN1Q6WQI6 88 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 KREMEN2Q8NCW0 462 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 SCAMP5Q8TAC9 235 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 NPY6RQ99463 290 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 C1QTNF2Q9BXJ5 285 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 EBPLQ9BY08 206 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 RAB6CQ9H0N0 254 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 CA10Q9NS85 328 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 WBP1LQ9NX94 342 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 PIPOXQ9P0Z9 390 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GALPQ9UBC7 116 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF780BQ9Y6R6 833 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GSTZ1O43708 216 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 IGHA1P01876 353 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 AMBPP02760 352 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 AREGP15514 252 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 ST6GAL1P15907 406 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 EN2P19622 333 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 ELOCQ15369 112 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 Q56UQ5 140 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 DLEU7Q6UYE1 221 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 LINC01551Q86U37 167 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 OR10V1Q8NGI7 309 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 OR4F5Q8NH21 305 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 TSSK2Q96PF2 358 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 OR4C12Q96R67 309 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 OR4F4Q96R69 305 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 PLEKHA3Q9HB20 300 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 P2RX2Q9UBL9 471 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 CGGBP1Q9UFW8 167 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 MED31Q9Y3C7 131 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 QSER1Q2KHR3 1735 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 M0QYG6 137 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PAPLNO95428 1278 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 MT-ND6P03923 174 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ASGR2P07307 311 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 DAP3P51398 398 aaKnown RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PNLIPRP1P54315 467 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 CD300EQ496F6 205 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 KIRREL2Q6UWL6 708 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 SSX8Q7RTT4 187 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 LIPHQ8WWY8 451 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 RAB37Q96AX2 223 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 C4orf36Q96KX1 117 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PRSS50Q9UI38 385 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 NSDHLQ15738 373 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 KCNMB1Q16558 191 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OR1B1Q8NGR6 318 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ADAT3Q96EY9 351 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 SDHCQ99643 169 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 C20orf144Q9BQM9 153 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PTGDR2Q9Y5Y4 395 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 TAF1LQ8IZX4 1826 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 COL4A1P02462 1669 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ANKRD34CP0C6C1 535 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 MDKP21741 143 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 FAM189BP81408 668 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 FOXK2Q01167 660 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 COX18Q8N8Q8 333 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OR4C16Q8NGL9 310 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OR10G4Q8NGN3 311 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 LOC105371242A0A075B767 164 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PPIAL4CA0A0B4J2A2 164 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OR5B21A6NL26 309 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF749O43361 778 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 B4GALT3O60512 393 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PPIAL4GP0DN37 164 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 EFNB1P98172 346 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 MLF2Q15773 248 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ANKRD55Q3KP44 614 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 PSAPL1Q6NUJ1 521 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OGFOD3Q6PK18 319 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 OR5D14Q8NGL3 314 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 ORAI3Q9BRQ5 295 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM38BQ9NVV0 291 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 V9GYY9 64 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 HIDE1A8MVS5 230 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 GABRDO14764 452 aa6.05□□□□□ -1.44
PDGFRA-201ENST00000257290 CTDSPLO15194 276 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms