RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 COX7A1P24310 79 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 KCNJ3P48549 501 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 PRR27Q6MZM9 219 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 ACSM6Q6P461 480 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF547Q8IVP9 402 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 TMEM147Q9BVK8 224 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 OR2D2Q9H210 308 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 DUSP21Q9H596 190 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 AAMDCQ9H7C9 122 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 NTN4Q9HB63 628 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 CYSLTR2Q9NS75 346 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 IL20Q9NYY1 176 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 PSG11Q9UQ72 335 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 SCN4AP35499 1836 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 TDRD15B5MCY1 1934 aaKnown RBP7.75□□□□□ -1.17
PTCD3-201ENST00000254630 HIST1H1DP16402 221 aaKnown RBP7.75□□□□□ -1.17
PTCD3-201ENST00000254630 PTGFRP43088 359 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 CADM3Q8N126 398 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 AKIP1Q9NQ31 210 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 FBXO34Q9NWN3 711 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 FKBP11Q9NYL4 201 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 NRXN2Q9P2S2 1712 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 IGHV3-43A0A0B4J1X8 118 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 C3orf85A0A1B0GTC6 90 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF727A8MUV8 499 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 K7ESF4 209 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 IGHV3-43DP0DP04 118 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 BCL3P20749 454 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 LPAR6P43657 344 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 YBX1P67809 324 aaKnown RBP7.75□□□□□ -1.17
PTCD3-201ENST00000254630 ZXDAP98168 799 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 LYG1Q8N1E2 194 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 ZDHHC22Q8N966 263 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 RXFP4Q8TDU9 374 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 TMED6Q8WW62 240 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 RYDENQ9NUL5 291 aaKnown RBP7.75□□□□□ -1.17
PTCD3-201ENST00000254630 DBX1A6NMT0 343 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 PPP5D1E7EU14 171 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 PDGFAP04085 211 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 LINC00303Q3SY05 128 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 Q3ZCU0 254 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 D2HGDHQ8N465 521 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 SMRP1Q8NCR6 262 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 NUBPLQ8TB37 319 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 LHX4Q969G2 390 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 KLK11Q9UBX7 282 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 TUBGCP6Q96RT7 1819 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 HRASP01112 189 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF17P17021 662 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 H3F3CQ6NXT2 135 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 CXorf58Q96LI9 332 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 FAAP24Q9BTP7 215 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 SIRT3Q9NTG7 399 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-201ENST00000254630 GAR1Q9NY12 217 aaKnown RBP7.75□□□□□ -1.17
PTCD3-201ENST00000254630 SCN9AQ15858 1988 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 A0A1B0GTQ1 180 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 DUS4LO95620 317 aaKnown RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 CDC20Q12834 499 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 FFAR4Q5NUL3 377 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 FAM27D1Q5T7N8 215 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 SMIM4Q8WVI0 70 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 RND1Q92730 232 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 PLPPR2Q96GM1 343 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 SIRT5Q9NXA8 310 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 MPZL1O95297 269 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 ADRB1P08588 477 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 PMP22Q01453 160 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 EXOSC2Q13868 293 aaKnown RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 KIAA0141Q14154 515 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 VN1R4Q7Z5H5 301 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 OR6X1Q8NH79 312 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 APOBEC4Q8WW27 367 aaKnown RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 ST8SIA2Q92186 375 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 HGDQ93099 445 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 NEIL1Q96FI4 390 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 PECRQ9BY49 303 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 ARL2-SNX15V9GYD0 113 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 EPHA2P29317 976 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 CDKN2AP42771 156 aaKnown RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 DEFA6Q01524 100 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 BAK1Q16611 211 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 TMEM128Q5BJH2 165 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 NCR3LG1Q68D85 454 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 GLDNQ6ZMI3 551 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 OR4F17Q8NGA8 305 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 SRRQ9GZT4 340 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 FAM60AQ9NP50 221 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 hADV38S2A0JD32 116 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 PYCARD-AS1I3L0S3 204 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 PLPP2O43688 288 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF629Q9UEG4 869 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-201ENST00000254630 G3V3Q6 166 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 H7BYZ3 331 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 SPINK9Q5DT21 86 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 OR2Y1Q8NGV0 311 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 OCEL1Q9H607 264 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 COL4A1P02462 1669 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 PPP1R2P9O14990 202 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 CST2P09228 141 aa7.74□□□□□ -1.17
PTCD3-201ENST00000254630 KIAA0040Q15053 153 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms