RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 HOXA1P49639 335 aaPredicted RBP12.78□□□□□ -0.36
MBD4-201ENST00000249910 PDCD1Q15116 288 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 NKAPLQ5M9Q1 402 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 ZNF680Q8NEM1 530 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 PCNPQ8WW12 178 aaKnown RBP12.78□□□□□ -0.36
MBD4-201ENST00000249910 PIGCQ92535 297 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 APH1AQ96BI3 265 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 DISC1C4P0D8 188 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 SDCBPO00560 298 aaPredicted RBP12.78□□□□□ -0.36
MBD4-201ENST00000249910 OR2A4O95047 310 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 NRASP01111 189 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
MBD4-201ENST00000249910 IFNA6P05013 189 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 TAF9Q16594 264 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 Q6ZSR3 168 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 BEND4Q6ZU67 534 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 MCEMP1Q8IX19 187 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 OR2A7Q96R45 310 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 HDHD3Q9BSH5 251 aaPredicted RBP12.78□□□□□ -0.36
MBD4-201ENST00000249910 DPCDQ9BVM2 203 aaPredicted RBP12.78□□□□□ -0.36
MBD4-201ENST00000249910 HEXA-AS1Q9H8Q6 139 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 ZNF629Q9UEG4 869 aaPredicted RBP12.78□□□□□ -0.36
MBD4-201ENST00000249910 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 AUP1Q9Y679 476 aa12.78□□□□□ -0.36
MBD4-201ENST00000249910 CEP295Q9C0D2 2601 aa12.77□□□□□ -0.36
MBD4-201ENST00000249910 LINC00862A6NCI5 91 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 I3L521 148 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 SCGNO76038 276 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 HTR3BO95264 441 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 AKR1C4P17516 323 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 PI3P19957 117 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 TCF15Q12870 199 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 HLXQ14774 488 aaPredicted RBP12.77□□□□□ -0.37
MBD4-201ENST00000249910 MEF2DQ14814 521 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 KRTAP27-1Q3LI81 207 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 ZNF100Q8IYN0 542 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 FAM89BQ8N5H3 189 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.37
MBD4-201ENST00000249910 GPR137Q96N19 417 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 PRRT1Q99946 306 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 BCL2L14Q9BZR8 327 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 BCO1Q9HAY6 547 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 hCG_38984A0A1B0GV85 526 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 MPC2O95563 127 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 NGFP01138 241 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 GIPP09681 153 aaPredicted RBP12.77□□□□□ -0.37
MBD4-201ENST00000249910 UBBP0CG47 229 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 TNFSF10P50591 281 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 GRK1Q15835 563 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 MARCH1Q8TCQ1 289 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 BORCS8Q96FH0 119 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 OR51B6Q9H340 312 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 CRIM1Q9NZV1 1036 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 PLEKHA6Q9Y2H5 1048 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 KMT2EQ8IZD2 1858 aa12.77□□□□□ -0.37
MBD4-201ENST00000249910 TRGV5A0A0B4J1U4 118 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 CCSO14618 274 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 GSTP1P09211 210 aaKnown RBP12.76□□□□□ -0.37
MBD4-201ENST00000249910 ZNF250P15622 560 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 ALDH3B1P43353 468 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 RBP2P50120 134 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 NPY4RP50391 375 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 PER3P56645 1201 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 RAB1AP62820 205 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 PPP1R1AQ13522 171 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 HIKESHIQ53FT3 197 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 TEX261Q6UWH6 196 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 GCNT2Q8N0V5 402 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 SVIPQ8NHG7 77 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 WDYHV1Q96HA8 205 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 ALX4Q9H161 411 aaPredicted RBP12.76□□□□□ -0.37
MBD4-201ENST00000249910 ACKR4Q9NPB9 350 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 ZNF107Q9UII5 783 aaPredicted RBP12.76□□□□□ -0.37
MBD4-201ENST00000249910 U3KQ87 197 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 MED12LQ86YW9 2145 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 CXCL2P19875 107 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 VAMP1P23763 118 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 RSU1Q15404 277 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 C12orf45Q8N5I9 185 aaPredicted RBP12.76□□□□□ -0.37
MBD4-201ENST00000249910 BHLHE23Q8NDY6 225 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 CASTOR1Q8WTX7 329 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 C10orf35Q96D05 121 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 ELMOD3Q96FG2 381 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 SEC22AQ96IW7 307 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 PECRQ9BY49 303 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 ZNF701Q9NV72 531 aaPredicted RBP12.76□□□□□ -0.37
MBD4-201ENST00000249910 PLEKHJ1Q9NW61 149 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 EDARQ9UNE0 448 aa12.76□□□□□ -0.37
MBD4-201ENST00000249910 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
MBD4-201ENST00000249910 IGKV1D-8A0A087WSZ0 117 aa12.75□□□□□ -0.37
MBD4-201ENST00000249910 ARPC5O15511 151 aa12.75□□□□□ -0.37
MBD4-201ENST00000249910 ZNF205O95201 554 aa12.75□□□□□ -0.37
MBD4-201ENST00000249910 CFDP00746 253 aaPredicted RBP12.75□□□□□ -0.37
MBD4-201ENST00000249910 CSTBP04080 98 aaKnown RBP12.75□□□□□ -0.37
MBD4-201ENST00000249910 SFTPBP07988 381 aa12.75□□□□□ -0.37
MBD4-201ENST00000249910 SOX8P57073 446 aa12.75□□□□□ -0.37
MBD4-201ENST00000249910 GK2Q14410 553 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms