RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 RTP5Q14D33 572 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 C11orf88Q6PI97 169 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 PIGCQ92535 297 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 BCL2L2Q92843 193 aaPredicted RBP19.79■□□□□ 0.76
HOXD9-201ENST00000249499 HEXA-AS1Q9H8Q6 139 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 CLCF1Q9UBD9 225 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 CSAG2Q9Y5P2 127 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 IL18BPO95998 194 aa19.78■□□□□ 0.76
HOXD9-201ENST00000249499 CST4P01036 141 aa19.78■□□□□ 0.76
HOXD9-201ENST00000249499 CD34P28906 385 aa19.78■□□□□ 0.76
HOXD9-201ENST00000249499 C2orf68Q2NKX9 166 aa19.78■□□□□ 0.76
HOXD9-201ENST00000249499 ZNF503-AS2A6NEH8 195 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 FIGNL2A6NMB9 653 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 AQP7O14520 342 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 SPRY1O43609 319 aaPredicted RBP19.77■□□□□ 0.76
HOXD9-201ENST00000249499 TSC22D2O75157 780 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 ZNF35P13682 527 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 SNU13P55769 128 aaKnown RBP19.77■□□□□ 0.76
HOXD9-201ENST00000249499 GMFBP60983 142 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 CLN3Q13286 438 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 TEX261Q6UWH6 196 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 MRPL21Q7Z2W9 205 aaKnown RBP19.77■□□□□ 0.76
HOXD9-201ENST00000249499 P4HA3Q7Z4N8 544 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 LHFPL1Q86WI0 220 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 OR5M8Q8NGP6 311 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 MITD1Q8WV92 249 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 EMG1Q92979 244 aaKnown RBP19.77■□□□□ 0.76
HOXD9-201ENST00000249499 CLEC4MQ9H2X3 399 aaPredicted RBP19.77■□□□□ 0.76
HOXD9-201ENST00000249499 U3KQ87 197 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 ASPMQ8IZT6 3477 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 C9orf170A2RU37 121 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 J3QW42 95 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 RRP8O43159 456 aaKnown RBP19.77■□□□□ 0.76
HOXD9-201ENST00000249499 ANGPTL7O43827 346 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 PTPRBP23467 1997 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 NFYAP23511 347 aaPredicted RBP19.77■□□□□ 0.76
HOXD9-201ENST00000249499 GABRR1P24046 479 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 FPR2P25090 351 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 APLNRP35414 380 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 PMELP40967 661 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 OR3A3P47888 321 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 CCDC36Q8IYA8 594 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 SAXO1Q8IYX7 474 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 OSR2Q8N2R0 312 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 TMEM185AQ8NFB2 350 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 Q8NFD4 153 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 OR5AP2Q8NGF4 316 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 OR8H1Q8NGG4 311 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 GPR132Q9UNW8 380 aa19.77■□□□□ 0.76
HOXD9-201ENST00000249499 EFSO43281 561 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 DTYMKP23919 212 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 HTR2BP41595 481 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 ECI1P42126 302 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 PMP22Q01453 160 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 SURF2Q15527 256 aaPredicted RBP19.76■□□□□ 0.75
HOXD9-201ENST00000249499 LIN54Q6MZP7 749 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 PEG10Q86TG7 708 aaKnown RBP19.76■□□□□ 0.75
HOXD9-201ENST00000249499 OR56B2PQ8NGI1 322 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 PHB2Q99623 299 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 C12orf49Q9H741 205 aa19.76■□□□□ 0.75
HOXD9-201ENST00000249499 PRSS44E7EML9 344 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 DUS4LO95620 317 aaKnown RBP19.75■□□□□ 0.75
HOXD9-201ENST00000249499 CD8AP01732 235 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 CCNOP22674 350 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 IL13RA1P78552 427 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FGL1Q08830 312 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 PPP1R1AQ13522 171 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 GRK1Q15835 563 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 LY6G6FQ5SQ64 297 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 SIGIRRQ6IA17 410 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 RPUSD3Q6P087 351 aaKnown RBP19.75■□□□□ 0.75
HOXD9-201ENST00000249499 C17orf107Q6ZR85 190 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 OVCH2Q7RTZ1 564 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 C6orf201Q7Z4U5 140 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 ST6GALNAC5Q9BVH7 336 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 NOP16Q9Y3C1 178 aaKnown RBP19.75■□□□□ 0.75
HOXD9-201ENST00000249499 RTTNQ86VV8 2226 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 IGKV1-12A0A0C4DH73 117 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 PQLC2LA1A4F0 135 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A10PA6NDY2 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A18PA6NE21 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A16PA6NEW6 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A20PA6NIJ5 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A8PA6NJQ4 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A7PA6NKC0 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 ZNF850A8MQ14 1090 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A22PA8MWA6 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A12PA8MX19 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A5PA8MXJ8 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A23PA8MXZ1 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 SIX6O95475 246 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 CNOT4O95628 575 aaKnown RBP19.75■□□□□ 0.75
HOXD9-201ENST00000249499 IGKV1D-12P01611 117 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A15PP0C7V4 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A13PP0C7W8 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A14PP0C7W9 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 FAM90A24PP0C7X0 464 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 CHATP28329 748 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 TMEM128Q5BJH2 165 aa19.75■□□□□ 0.75
HOXD9-201ENST00000249499 DCAF12L2Q5VW00 463 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms