RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF788Q6ZQV5 615 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 UTS2BQ765I0 119 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
VPREB3-201ENST00000248948 DNAAF1Q8NEP3 725 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 ANGPTL6Q8NI99 470 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 CNIH3Q8TBE1 160 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 GAFA1Q96PS6 74 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 CCL13Q99616 98 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 NRIP2Q9BQI9 281 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 ZNF222Q9UK12 451 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 DSCAML1Q8TD84 2053 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 STAB1Q9NY15 2570 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 A6NIN4 97 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 ZNF879B4DU55 563 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 PLATP00750 562 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 LIMS3P0CW19 117 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 LIMS4P0CW20 117 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 PIPP12273 146 aaPredicted RBP10.58□□□□□ -0.72
VPREB3-201ENST00000248948 ZNF20P17024 532 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 AMY2BP19961 511 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 FPR2P25090 351 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 FUT6P51993 359 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 GBX2P52951 348 aaPredicted RBP10.58□□□□□ -0.72
VPREB3-201ENST00000248948 CAV3P56539 151 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 MED21Q13503 144 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 UBE2V2Q15819 145 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 KRTAP24-1Q3LI83 254 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 C9orf139Q6ZV77 190 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 SPATA3Q8NHX4 192 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 SPSB1Q96BD6 273 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 SEH1LQ96EE3 360 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 BORCS8Q96FH0 119 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 MED30Q96HR3 178 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 SLC6A7Q99884 636 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 COMMD4Q9H0A8 199 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 ISG20L2Q9H9L3 353 aaKnown RBP10.58□□□□□ -0.72
VPREB3-201ENST00000248948 HES4Q9HCC6 221 aa10.58□□□□□ -0.72
VPREB3-201ENST00000248948 RPUSD1Q9UJJ7 312 aaKnown RBP10.58□□□□□ -0.72
VPREB3-201ENST00000248948 DIMT1Q9UNQ2 313 aaKnown RBP10.58□□□□□ -0.72
VPREB3-201ENST00000248948 EXOSC1Q9Y3B2 195 aaKnown RBP10.58□□□□□ -0.72
VPREB3-201ENST00000248948 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 A0A1B0GW55 424 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 H3BSH0 61 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 SYNGR1O43759 233 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4L2P0CJ85 424 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4L3P0CJ86 424 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4L4P0CJ87 422 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4L5P0CJ88 424 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4L6P0CJ89 424 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4L7P0CJ90 424 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 PSG2P11465 335 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 MMP9P14780 707 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 MYL12AP19105 171 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 PRKACBP22694 351 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 BPIFB3P59826 476 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 GMFBP60983 142 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 FGF12P61328 243 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 SLC34A1Q06495 639 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 CCDC58Q4VC31 144 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DMRTC1Q5HYR2 192 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 METTL11BQ5VVY1 283 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-201ENST00000248948 TMPRSS11AQ6ZMR5 421 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 ACP7Q6ZNF0 438 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 BTN2A1Q7KYR7 527 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 CALHM1Q8IU99 346 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 RDH10Q8IZV5 341 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 ZNF676Q8N7Q3 588 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 LY6G5BQ8NDX9 201 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 TRMT10AQ8TBZ6 339 aaKnown RBP10.57□□□□□ -0.72
VPREB3-201ENST00000248948 RPS4Y2Q8TD47 263 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 FBLIM1Q8WUP2 373 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 ADAT3Q96EY9 351 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-201ENST00000248948 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 SNTG1Q9NSN8 517 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 CNOT2Q9NZN8 540 aaKnown RBP10.57□□□□□ -0.72
VPREB3-201ENST00000248948 DUX4Q9UBX2 424 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-201ENST00000248948 CAB39Q9Y376 341 aaPredicted RBP10.57□□□□□ -0.72
VPREB3-201ENST00000248948 KPTNQ9Y664 436 aa10.57□□□□□ -0.72
VPREB3-201ENST00000248948 TRBV23-1A0A0A0MS06 115 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 FAM230AA0A1W2PPH8 454 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 ERICH4A6NGS2 130 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 H0YJX3 145 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 NXPH2O95156 264 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 ZFPL1O95159 310 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 KNG1P01042 644 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 MT-ND2P03891 347 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 AZGP1P25311 298 aaKnown RBP10.56□□□□□ -0.72
VPREB3-201ENST00000248948 RBP2P50120 134 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 ERVK11-1P61568 191 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 IKZF1Q13422 519 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms