RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 AQP10Q96PS8 301 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 ADAT1Q9BUB4 502 aaKnown RBP12.56□□□□□ -0.4
HIF3A-202ENST00000244303 SMOC1Q9H4F8 434 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 SH2D2AQ9NP31 389 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 GSKIPQ9P0R6 139 aa12.56□□□□□ -0.4
HIF3A-202ENST00000244303 DHRS7CA6NNS2 312 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 APOC1P02654 83 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 SERPINA5P05154 406 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 ACKR3P25106 362 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 SUCLG1P53597 346 aaKnown RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 S100A10P60903 97 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 GUCA2BQ16661 112 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 RAB11FIP2Q7L804 512 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 CBLN2Q8IUK8 224 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 M1APQ8TC57 530 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 C12orf57Q99622 126 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 ACKR4Q9NPB9 350 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 C14orf166Q9Y224 244 aaKnown RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 PMS2P1A4D2B8 440 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 FIGNL2A6NMB9 653 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 CSTBP04080 98 aaKnown RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 TMEM225BP0DP42 221 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 ADCYAP1P18509 176 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 MTCP1P56278 107 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 PRSS12P56730 875 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 RAC1P63000 192 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 IL15RAQ13261 267 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 ARL6IP1Q15041 203 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 SURF2Q15527 256 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 LPAL2Q16609 132 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 PLEKHN1Q494U1 663 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF468Q5VIY5 522 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 FAM27BQ5VT28 67 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 NSUN5P2Q63ZY6 315 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 RPS19BP1Q86WX3 136 aaKnown RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 C20orf196Q8IYI0 205 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 SEMA6DQ8NFY4 1073 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 WNT2BQ93097 391 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 NTNG2Q96CW9 530 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 Q96M66 194 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF2Q9BSG1 426 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 OR2S2Q9NQN1 319 aa12.55□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF629Q9UEG4 869 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 KLF2Q9Y5W3 355 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-202ENST00000244303 MSTNO14793 375 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 CA11O75493 328 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 SFTPBP07988 381 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 FAM157CP0CG43 387 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 PET100P0DJ07 73 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 MRPS34P82930 218 aaKnown RBP12.54□□□□□ -0.4
HIF3A-202ENST00000244303 SRSF3P84103 164 aaKnown RBP12.54□□□□□ -0.4
HIF3A-202ENST00000244303 CHAF1BQ13112 559 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 FOXRED2Q8IWF2 684 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 OR2Y1Q8NGV0 311 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 ARL11Q969Q4 196 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 SLC5A7Q9GZV3 580 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 ARID1AO14497 2285 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 SGCEO43556 437 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 SPRY1O43609 319 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-202ENST00000244303 CBR3O75828 277 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 IFNA2P01563 188 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 CRYGSP22914 178 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 RAB13P51153 203 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 HGFACQ04756 655 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 PPA1Q15181 289 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 HFEQ30201 348 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 RTL6Q6ICC9 239 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 RPUSD3Q6P087 351 aaKnown RBP12.54□□□□□ -0.4
HIF3A-202ENST00000244303 INTS12Q96CB8 462 aaKnown RBP12.54□□□□□ -0.4
HIF3A-202ENST00000244303 TREM1Q9NP99 234 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 C1orf123Q9NWV4 160 aa12.54□□□□□ -0.4
HIF3A-202ENST00000244303 NSG1A0A0A6YYJ2 146 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 FAM230AA0A1W2PPH8 454 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 NTF4P34130 210 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 MLF1P58340 268 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF774Q6NX45 483 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 SULF2Q8IWU5 870 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 CCDC54Q8NEL0 328 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 FAAP24Q9BTP7 215 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF581Q9P0T4 197 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 ZNF705EA8MWA4 302 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-202ENST00000244303 SYNGR3O43761 229 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 H2AFB1P0C5Y9 115 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 RBMXP38159 391 aaKnown RBP12.53□□□□□ -0.4
HIF3A-202ENST00000244303 FOLR3P41439 243 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 B2MP61769 119 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 RAB35Q15286 201 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 TAF9Q16594 264 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 H3F3CQ6NXT2 135 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 METTL9Q9H1A3 318 aa12.53□□□□□ -0.4
HIF3A-202ENST00000244303 CRLF2Q9HC73 371 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms