RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 C9orf135Q5VTT2 229 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 RPUSD3Q6P087 351 aaKnown RBP16.56■□□□□ 0.24
YBX3-201ENST00000228251 OR5AP2Q8NGF4 316 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 RTBDNQ9BSG5 229 aaPredicted RBP16.56■□□□□ 0.24
YBX3-201ENST00000228251 ZNF581Q9P0T4 197 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 MED12LQ86YW9 2145 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 FXYD6-FXYD2A0A087WZ82 144 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 LRP3O75074 770 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 HTR3BO95264 441 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 NUBP1P53384 320 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 RRADP55042 308 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 PDZK1IP1Q13113 114 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 RSU1Q15404 277 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 TMEM128Q5BJH2 165 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 OR8H3Q8N146 312 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 Q8NFD4 153 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 PHB2Q99623 299 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 ST6GALNAC5Q9BVH7 336 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 FXYD6Q9H0Q3 95 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 MAB21L2Q9Y586 359 aa16.55■□□□□ 0.24
YBX3-201ENST00000228251 SPAARA0A1B0GVQ0 90 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 OR5H14A6NHG9 310 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 TUBAL3A6NHL2 446 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 NOS1APO75052 506 aaPredicted RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 SLC25A4P12235 298 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 GABRR1P24046 479 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 OR3A3P47888 321 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 TNFSF10P50591 281 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 GMFBP60983 142 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 CSNK2A3Q8NEV1 391 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 MRPS24Q96EL2 167 aaKnown RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 POM121L2Q96KW2 1035 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 FGF23Q9GZV9 251 aaPredicted RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 IRF2BPLQ9H1B7 796 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 DEFB127Q9H1M4 99 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 GP6Q9HCN6 339 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 CSAG2Q9Y5P2 127 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 TRGV5A0A0B4J1U4 118 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 A0A0B4J2A0 478 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 CCSO14618 274 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 RPS2P15880 293 aaKnown RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 AGTR1P30556 359 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 CALCRP30988 508 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 NPY4RP50391 375 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 ATP1B3P54709 279 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 SUPT4H1P63272 117 aaKnown RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 SRSF6Q13247 344 aaKnown RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 TAF9Q16594 264 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 IGF2-ASQ6U949 168 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 C3P1Q6ZMU1 363 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 MOB3CQ70IA8 216 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 ZSCAN4Q8NAM6 433 aaPredicted RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 TMEM178AQ8NBL3 297 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 MAFIPQ8WZ33 124 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 HDHD3Q9BSH5 251 aaPredicted RBP16.54■□□□□ 0.24
YBX3-201ENST00000228251 PLEKHJ1Q9NW61 149 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 SHPKQ9UHJ6 478 aa16.54■□□□□ 0.24
YBX3-201ENST00000228251 CELSR3Q9NYQ7 3312 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 B3GALNT1O75752 331 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 IL18BPO95998 194 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 SERPINA5P05154 406 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 SFTPBP07988 381 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 AKR1C4P17516 323 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 MPGP29372 298 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 ARG2P78540 354 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 PLCXD3Q63HM9 321 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 ZNF660Q6AZW8 331 aaPredicted RBP16.53■□□□□ 0.24
YBX3-201ENST00000228251 LIN54Q6MZP7 749 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 IGFL2Q6UWQ7 119 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 VASH2Q86V25 355 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 GSX2Q9BZM3 304 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 PPA2Q9H2U2 334 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 DECR2Q9NUI1 292 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 CRIM1Q9NZV1 1036 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 PRSS50Q9UI38 385 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 SLC7A11Q9UPY5 501 aa16.53■□□□□ 0.24
YBX3-201ENST00000228251 SDCBPO00560 298 aaPredicted RBP16.52■□□□□ 0.24
YBX3-201ENST00000228251 NKX2-8O15522 239 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 CSTBP04080 98 aaKnown RBP16.52■□□□□ 0.24
YBX3-201ENST00000228251 WT1P19544 449 aaPredicted RBP16.52■□□□□ 0.24
YBX3-201ENST00000228251 ARR3P36575 388 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 FGL1Q08830 312 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 SURF2Q15527 256 aaPredicted RBP16.52■□□□□ 0.24
YBX3-201ENST00000228251 ESCO2Q56NI9 601 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 TMEM17Q86X19 198 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 CALHM1Q8IU99 346 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 OR56B2PQ8NGI1 322 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 PIGCQ92535 297 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 POM121Q96HA1 1249 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 SULT4A1Q9BR01 284 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 EHFQ9NZC4 300 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 AK3Q9UIJ7 227 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 ZNF175Q9Y473 711 aa16.52■□□□□ 0.24
YBX3-201ENST00000228251 DOCK7Q96N67 2140 aa16.52■□□□□ 0.23
YBX3-201ENST00000228251 PQLC2LA1A4F0 135 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 SFT2D2O95562 160 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 PLATP00750 562 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 VAMP1P23763 118 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 DTYMKP23919 212 aa16.51■□□□□ 0.23
YBX3-201ENST00000228251 OR3A2P47893 321 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms