RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 FBXW12Q6X9E4 464 aa12.81□□□□□ -0.36
CCDC47-201ENST00000225726 ZNF782Q6ZMW2 699 aaPredicted RBP12.81□□□□□ -0.36
CCDC47-201ENST00000225726 NUDCD2Q8WVJ2 157 aa12.81□□□□□ -0.36
CCDC47-201ENST00000225726 Q96M66 194 aa12.81□□□□□ -0.36
CCDC47-201ENST00000225726 OR51B6Q9H340 312 aa12.81□□□□□ -0.36
CCDC47-201ENST00000225726 CRIM1Q9NZV1 1036 aa12.81□□□□□ -0.36
CCDC47-201ENST00000225726 MYO7BQ6PIF6 2116 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 C7orf66A4D0T2 115 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 MFNGO00587 321 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 ANGPTL7O43827 346 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 HTR3BO95264 441 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 CSTBP04080 98 aaKnown RBP12.8□□□□□ -0.36
CCDC47-201ENST00000225726 CD74P04233 296 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 FAM87AP0C7U9 286 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 LINC00303Q3SY05 128 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 ZSCAN4Q8NAM6 433 aaPredicted RBP12.8□□□□□ -0.36
CCDC47-201ENST00000225726 OR8S1Q8NH09 359 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 ANKRD30BLA7E2S9 258 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 I3L521 148 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 PRRG2O14669 202 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 NDUFB6O95139 128 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 PPP1CBP62140 327 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 ARL6IP1Q15041 203 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 RTN4RL2Q86UN3 420 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 OR4D10Q8NGI6 311 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 OR6F1Q8NGZ6 308 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 DVL3Q92997 716 aaPredicted RBP12.8□□□□□ -0.36
CCDC47-201ENST00000225726 ARHGAP5-AS1Q96IT6 56 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 IFT46Q9NQC8 304 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 PCDHB16Q9NRJ7 776 aa12.8□□□□□ -0.36
CCDC47-201ENST00000225726 DCHS1Q96JQ0 3298 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 SSX5O60225 188 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 AGFG2O95081 481 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 RAB3DO95716 219 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 PLATP00750 562 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 GLI4P10075 376 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 HPSE2Q8WWQ2 592 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 KCNK7Q9Y2U2 307 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 MPC1Q9Y5U8 109 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 SPTBN2O15020 2390 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 A0A0A6YYJ9 748 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 OR5H1A6NKK0 313 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 ZNF736B4DX44 427 aaPredicted RBP12.79□□□□□ -0.36
CCDC47-201ENST00000225726 BLVRBP30043 206 aaPredicted RBP12.79□□□□□ -0.36
CCDC47-201ENST00000225726 GFRALQ6UXV0 394 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 FAM169BQ8N8A8 192 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 OR5A2Q8NGI9 324 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 HIST1H2AAQ96QV6 131 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 PECRQ9BY49 303 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 NKIRAS2Q9NYR9 191 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 ANAPC10Q9UM13 185 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 IGKV1-12A0A0C4DH73 117 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 SMLR1H3BR10 107 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 IGKV1D-12P01611 117 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 RBMS2Q15434 407 aaKnown RBP12.79□□□□□ -0.36
CCDC47-201ENST00000225726 C3P1Q6ZMU1 363 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
CCDC47-201ENST00000225726 FYTTD1Q96QD9 318 aaKnown RBP12.79□□□□□ -0.36
CCDC47-201ENST00000225726 FGF23Q9GZV9 251 aaPredicted RBP12.79□□□□□ -0.36
CCDC47-201ENST00000225726 OR10A4Q9H209 315 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 GHITMQ9H3K2 345 aa12.79□□□□□ -0.36
CCDC47-201ENST00000225726 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 CBX5P45973 191 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
CCDC47-201ENST00000225726 SPATA46Q5T0L3 261 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ATAD3CQ5T2N8 411 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ZNF474Q6S9Z5 364 aaPredicted RBP12.78□□□□□ -0.36
CCDC47-201ENST00000225726 DOLPP1Q86YN1 238 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 SAXO1Q8IYX7 474 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 MRPS24Q96EL2 167 aaKnown RBP12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ST6GAL2Q96JF0 529 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ZNF835Q9Y2P0 537 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 TEX46H3BTG2 121 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 PRAF2O60831 178 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 CA11O75493 328 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 IL32P24001 234 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 UCP2P55851 309 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 MEF2DQ14814 521 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 C21orf62-AS1Q17RA5 79 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 OR51F2Q8NH61 342 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 GIMAP1Q8WWP7 306 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 OR5P3Q8WZ94 311 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 SNRNP40Q96DI7 357 aaKnown RBP12.78□□□□□ -0.36
CCDC47-201ENST00000225726 DHRS9Q9BPW9 319 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 FLVCR2Q9UPI3 526 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ARPC1BO15143 372 aaKnown RBP12.78□□□□□ -0.36
CCDC47-201ENST00000225726 AKR7A2O43488 359 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 RPL35P42766 123 aaKnown RBP12.78□□□□□ -0.36
CCDC47-201ENST00000225726 OR3A3P47888 321 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 GPM6AP51674 278 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 OR2T2Q6IF00 324 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 CALHM1Q8IU99 346 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 OSR2Q8N2R0 312 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ZNF611Q8N823 705 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 OR51S1Q8NGJ8 323 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ST8SIA4Q92187 359 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 C1QTNF6Q9BXI9 259 aa12.78□□□□□ -0.36
CCDC47-201ENST00000225726 MOV10Q9HCE1 1003 aaKnown RBP12.78□□□□□ -0.36
CCDC47-201ENST00000225726 ACACAQ13085 2346 aa12.77□□□□□ -0.36
CCDC47-201ENST00000225726 SERPINE3A8MV23 424 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms