RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 DOK3Q7L591 496 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 LYZL2Q7Z4W2 148 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 EIF5A2Q9GZV4 153 aaKnown RBP10.85□□□□□ -0.67
NUP88-201ENST00000225696 MOB1AQ9H8S9 216 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 KLRF1Q9NZS2 232 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 MIOXQ9UGB7 285 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
NUP88-201ENST00000225696 MEMO1Q9Y316 297 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 KPTNQ9Y664 436 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 OR5H15A6NDH6 313 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 CRYM-AS1A6NIL9 109 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 CCDC85CA6NKD9 419 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 EIF1BO60739 113 aaKnown RBP10.84□□□□□ -0.67
NUP88-201ENST00000225696 CLN5O75503 358 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 IGLV3-19P01714 112 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 IGHV2-5P01817 119 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 DANCRP0C864 163 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 PRF1P14222 555 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 ZNF14P17017 642 aaPredicted RBP10.84□□□□□ -0.67
NUP88-201ENST00000225696 RAB5AP20339 215 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 EIF1P41567 113 aaKnown RBP10.84□□□□□ -0.67
NUP88-201ENST00000225696 EIF5AP63241 154 aaKnown RBP10.84□□□□□ -0.67
NUP88-201ENST00000225696 FAM3AP98173 230 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 NHLH2Q02577 135 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 PHYHD1Q5SRE7 291 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 FAM69BQ5VUD6 431 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 ZNF561Q8N587 486 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 UBAC2Q8NBM4 344 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 NFAM1Q8NET5 270 aaPredicted RBP10.84□□□□□ -0.67
NUP88-201ENST00000225696 OR10G3Q8NGC4 313 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 STT3BQ8TCJ2 826 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 TOMM40LQ969M1 308 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 MARS2Q96GW9 593 aaKnown RBP10.84□□□□□ -0.67
NUP88-201ENST00000225696 ZNF251Q9BRH9 671 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 FAAP24Q9BTP7 215 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 BCL2L14Q9BZR8 327 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 CHRNA10Q9GZZ6 450 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.84□□□□□ -0.67
NUP88-201ENST00000225696 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 IGHV1OR21-1A0A087WYE8 117 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 A0A1B0GX78 115 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 FAM221AA4D161 298 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 ANGPTL7O43827 346 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 ZNF43P17038 809 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 PTGDSP41222 190 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 PIGPP57054 158 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 ACER2Q5QJU3 275 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 RPUSD3Q6P087 351 aaKnown RBP10.84□□□□□ -0.67
NUP88-201ENST00000225696 OR52M1Q8NGK5 317 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 HPSE2Q8WWQ2 592 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 PGAM5Q96HS1 289 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 ARV1Q9H2C2 271 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 RGCCQ9H4X1 137 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 PADI1Q9ULC6 663 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 EML6Q6ZMW3 1958 aa10.84□□□□□ -0.67
NUP88-201ENST00000225696 A0A1W2PR77 199 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 OR5AC1P0C628 307 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 RD3LP0DJH9 198 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 OR13C7P0DN81 318 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 TMEM225BP0DP42 221 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 PPP1CCP36873 323 aaKnown RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 SULT1A1P50225 295 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 RNF212Q495C1 297 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 NCMAPQ5T1S8 102 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 SGPP2Q8IWX5 399 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 LRRC18Q8N456 261 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 HSD17B11Q8NBQ5 300 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 NAXEQ8NCW5 288 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 RARRES2Q99969 163 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 FGF21Q9NSA1 209 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 PLEKHJ1Q9NW61 149 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 PPP4R1LQ9P1A2 415 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 NXT1Q9UKK6 140 aaKnown RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 POMT1Q9Y6A1 747 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 TRBV11-1A0A0K0K1C0 115 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 SERPINE3A8MV23 424 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 UMAD1C9J7I0 102 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 OR5H8P0DN80 308 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 CD38P28907 300 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 ZNF41P51814 821 aaPredicted RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 UCP2P55851 309 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 SURF2Q15527 256 aaPredicted RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 HIST3H3Q16695 136 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 PHLDA2Q53GA4 152 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 OPN5Q6U736 354 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 PLXDC2Q6UX71 529 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 D2HGDHQ8N465 521 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 AKR7LQ8NHP1 331 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 CD300LFQ8TDQ1 290 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 TCEAL3Q969E4 200 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 ZNF501Q96CX3 271 aaPredicted RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 MRPL38Q96DV4 380 aaKnown RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 TAAR9Q96RI9 348 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 ABHD14AQ9BUJ0 271 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 FAM212BQ9NTI7 297 aaPredicted RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 METTL1Q9UBP6 276 aaKnown RBP10.83□□□□□ -0.68
NUP88-201ENST00000225696 TINAGQ9UJW2 476 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 PIGLQ9Y2B2 252 aa10.83□□□□□ -0.68
NUP88-201ENST00000225696 IGHV1OR15-9A0A0B4J2B8 117 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms