RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 NUDT8Q8WV74 236 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 C2orf50Q96LR7 162 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 OR8B4Q96RC9 309 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 ZNF665Q9H7R5 613 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MMP25Q9NPA2 562 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 ZNF586Q9NXT0 402 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 INSIG2Q9Y5U4 225 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 F5P12259 2224 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MYH9P35579 1960 aaKnown RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 ETHE1O95571 254 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 EPPINO95925 133 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 SNRPNP63162 240 aaKnown RBP9.4□□□□□ -0.9
TRPS1-201ENST00000220888 ISXQ2M1V0 245 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 THSD4Q6ZMP0 1018 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 BLNKQ8WV28 456 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 DIRC2Q96SL1 478 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 RHOFQ9HBH0 211 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 CES1P1Q9UKY3 287 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 TCRBV5S1A1TA0A578 114 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 OR2T8A6NH00 312 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 CTSVO60911 334 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 PDGFAP04085 211 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 CELA2BP08218 269 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-201ENST00000220888 DOLPP1Q86YN1 238 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 NUBPLQ8TB37 319 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 OR2D2Q9H210 308 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 PRDM7Q9NQW5 492 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 UQCC1Q9NVA1 299 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 RCL1Q9Y2P8 373 aaKnown RBP9.4□□□□□ -0.9
TRPS1-201ENST00000220888 EPXP11678 715 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 KIR2DL1P43626 348 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-201ENST00000220888 KIR2DL2P43627 348 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-201ENST00000220888 OR3A1P47881 315 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 ERVFC1-1P60608 527 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 OR2F1Q13607 317 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 ECSCRQ19T08 205 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 TGIF2LYQ8IUE0 185 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 TGIF2LXQ8IUE1 241 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 OR13C5Q8NGS8 318 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 OR4S2Q8NH73 311 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 SLC45A2Q9UMX9 530 aa9.4□□□□□ -0.9
TRPS1-201ENST00000220888 FMODQ06828 376 aa9.4□□□□□ -0.91
TRPS1-201ENST00000220888 MUC20Q8N307 709 aaPredicted RBP9.4□□□□□ -0.91
TRPS1-201ENST00000220888 MYO7AQ13402 2215 aa9.4□□□□□ -0.91
TRPS1-201ENST00000220888 PRSS44E7EML9 344 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 ADAM10O14672 748 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 AKR7A2O43488 359 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 AVPI1Q5T686 147 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 OTUD1Q5VV17 481 aaPredicted RBP9.39□□□□□ -0.91
TRPS1-201ENST00000220888 C16orf47Q6ZP98 133 aaPredicted RBP9.39□□□□□ -0.91
TRPS1-201ENST00000220888 RASL10BQ96S79 203 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 NAA50Q9GZZ1 169 aaKnown RBP9.39□□□□□ -0.91
TRPS1-201ENST00000220888 CA10Q9NS85 328 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 ARPC4-TTLL3A0A0A6YYG9 625 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 A0A1B0GTH9 108 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 C7orf72A4D263 438 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 IGHV3-13P01766 116 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 IGHV3-7P01780 117 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 ORM2P19652 201 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 LRRTM1Q86UE6 522 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 ZNF485Q8NCK3 441 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 OR2M3Q8NG83 312 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 NRG4Q8WWG1 115 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 SLC25A46Q96AG3 418 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 SPNS1Q9H2V7 528 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 SF3B6Q9Y3B4 125 aaKnown RBP9.39□□□□□ -0.91
TRPS1-201ENST00000220888 OPN1MWP04001 364 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 OPN1MW2P0DN77 364 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 OPN1MW3P0DN78 364 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 BTN1A1Q13410 526 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 KISS1Q15726 138 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 PRSS42Q7Z5A4 293 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 UCK1Q9HA47 277 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 TMEM30AQ9NV96 361 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 IGHV5-10-1A0A0J9YXX1 117 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 ZAR1LA6NP61 321 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 CD3DP04234 171 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 SP1P08047 785 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 VDAC1P21796 283 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 RPS19P39019 145 aaKnown RBP9.39□□□□□ -0.91
TRPS1-201ENST00000220888 DGCR2P98153 550 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 OR5M8Q8NGP6 311 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 PIMREGQ9BSJ6 248 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 SF3B5Q9BWJ5 86 aaKnown RBP9.39□□□□□ -0.91
TRPS1-201ENST00000220888 MRPL22Q9NWU5 206 aaKnown RBP9.39□□□□□ -0.91
TRPS1-201ENST00000220888 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
TRPS1-201ENST00000220888 UMAD1C9J7I0 102 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 GIPP09681 153 aaPredicted RBP9.38□□□□□ -0.91
TRPS1-201ENST00000220888 RRN3P1Q2M238 152 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 CGB2Q6NT52 195 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 Q8WTZ3 238 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 LINC00052Q96N35 136 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 PRDM14Q9GZV8 571 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 KNTC1P50748 2209 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 OR2C1O95371 312 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 GPANK1O95872 356 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 SBK3P0C264 359 aa9.38□□□□□ -0.91
TRPS1-201ENST00000220888 PATE4P0C8F1 98 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms