RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 LSM5Q9Y4Y9 91 aaKnown RBP15.1■□□□□ 0.01
USB1-201ENST00000219281 C9JQL5 133 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 FCGR3AP08637 254 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 SPP1P10451 314 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 SMCO1Q147U7 214 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 GGNBP1Q5YKI7 109 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 ZFP82Q8N141 532 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 C2CD4CQ8TF44 421 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 MRPL24Q96A35 216 aaKnown RBP15.09■□□□□ 0.01
USB1-201ENST00000219281 RBM24Q9BX46 236 aaKnown RBP15.09■□□□□ 0.01
USB1-201ENST00000219281 BIN3Q9NQY0 253 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 CHCHD2Q9Y6H1 151 aaPredicted RBP15.09■□□□□ 0.01
USB1-201ENST00000219281 DEDDO75618 318 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 DKK1O94907 266 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 SCGB1D2O95969 90 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 CD5P06127 495 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 TMEM33P57088 247 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 ARL6IP1Q15041 203 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 FAM76BQ5HYJ3 339 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 AVPI1Q5T686 147 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 GLYATL2Q8WU03 294 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 NABP1Q96AH0 204 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 SULT4A1Q9BR01 284 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 AKIRIN1Q9H9L7 192 aaPredicted RBP15.09■□□□□ 0.01
USB1-201ENST00000219281 GPR173Q9NS66 373 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 PCDHGA1Q9Y5H4 931 aa15.09■□□□□ 0.01
USB1-201ENST00000219281 MEX3AA1L020 520 aaKnown RBP15.08■□□□□ 0
USB1-201ENST00000219281 CRYM-AS1A6NIL9 109 aa15.08■□□□□ 0
USB1-201ENST00000219281 M0R135 149 aa15.08■□□□□ 0
USB1-201ENST00000219281 MSTNO14793 375 aa15.08■□□□□ 0
USB1-201ENST00000219281 MTRF1O75570 445 aaKnown RBP15.08■□□□□ 0
USB1-201ENST00000219281 HEXAP06865 529 aa15.08■□□□□ 0
USB1-201ENST00000219281 CTSDP07339 412 aaPredicted RBP15.08■□□□□ 0
USB1-201ENST00000219281 TMEM225BP0DP42 221 aa15.08■□□□□ 0
USB1-201ENST00000219281 CHAF1BQ13112 559 aa15.08■□□□□ 0
USB1-201ENST00000219281 PPA1Q15181 289 aa15.08■□□□□ 0
USB1-201ENST00000219281 AKIRIN2Q53H80 203 aa15.08■□□□□ 0
USB1-201ENST00000219281 ZNF385CQ66K41 422 aaPredicted RBP15.08■□□□□ 0
USB1-201ENST00000219281 RTL6Q6ICC9 239 aa15.08■□□□□ 0
USB1-201ENST00000219281 RPUSD3Q6P087 351 aaKnown RBP15.08■□□□□ 0
USB1-201ENST00000219281 Q6ZRG5 221 aa15.08■□□□□ 0
USB1-201ENST00000219281 TMEM54Q969K7 222 aa15.08■□□□□ 0
USB1-201ENST00000219281 ZNF799Q96GE5 643 aa15.08■□□□□ 0
USB1-201ENST00000219281 PRRX2Q99811 253 aa15.08■□□□□ 0
USB1-201ENST00000219281 PARP11Q9NR21 331 aa15.08■□□□□ 0
USB1-201ENST00000219281 TUBD1Q9UJT1 453 aa15.08■□□□□ 0
USB1-201ENST00000219281 PADI1Q9ULC6 663 aa15.08■□□□□ 0
USB1-201ENST00000219281 RRP8O43159 456 aaKnown RBP15.08■□□□□ 0
USB1-201ENST00000219281 CA11O75493 328 aa15.08■□□□□ 0
USB1-201ENST00000219281 IFNA21P01568 189 aa15.08■□□□□ 0
USB1-201ENST00000219281 NR2C1P13056 603 aa15.08■□□□□ 0
USB1-201ENST00000219281 ECI1P42126 302 aa15.08■□□□□ 0
USB1-201ENST00000219281 RRADP55042 308 aa15.08■□□□□ 0
USB1-201ENST00000219281 H3F3AP84243 136 aa15.08■□□□□ 0
USB1-201ENST00000219281 PEA15Q15121 130 aa15.08■□□□□ 0
USB1-201ENST00000219281 SNAI3Q3KNW1 292 aa15.08■□□□□ 0
USB1-201ENST00000219281 C10orf128Q5T292 105 aa15.08■□□□□ 0
USB1-201ENST00000219281 CLEC9AQ6UXN8 241 aa15.08■□□□□ 0
USB1-201ENST00000219281 WDR5BQ86VZ2 330 aa15.08■□□□□ 0
USB1-201ENST00000219281 CCDC74BQ96LY2 380 aa15.08■□□□□ 0
USB1-201ENST00000219281 Q96M66 194 aa15.08■□□□□ 0
USB1-201ENST00000219281 UCN2Q96RP3 112 aa15.08■□□□□ 0
USB1-201ENST00000219281 C12orf57Q99622 126 aa15.08■□□□□ 0
USB1-201ENST00000219281 IER2Q9BTL4 223 aa15.08■□□□□ 0
USB1-201ENST00000219281 FAAP24Q9BTP7 215 aa15.08■□□□□ 0
USB1-201ENST00000219281 PARP12Q9H0J9 701 aaKnown RBP15.08■□□□□ 0
USB1-201ENST00000219281 ANXA10Q9UJ72 324 aa15.08■□□□□ 0
USB1-201ENST00000219281 ANGPTL7O43827 346 aa15.07■□□□□ 0
USB1-201ENST00000219281 GDF9O60383 454 aa15.07■□□□□ 0
USB1-201ENST00000219281 JTBO76095 146 aa15.07■□□□□ 0
USB1-201ENST00000219281 ZNF205O95201 554 aa15.07■□□□□ 0
USB1-201ENST00000219281 CELA2AP08217 269 aa15.07■□□□□ 0
USB1-201ENST00000219281 OR8U9P0C7N5 309 aa15.07■□□□□ 0
USB1-201ENST00000219281 KCNJ3P48549 501 aa15.07■□□□□ 0
USB1-201ENST00000219281 MTCP1P56278 107 aa15.07■□□□□ 0
USB1-201ENST00000219281 DHRS11Q6UWP2 260 aa15.07■□□□□ 0
USB1-201ENST00000219281 MAML2Q8IZL2 1156 aaPredicted RBP15.07■□□□□ 0
USB1-201ENST00000219281 OR8U1Q8NH10 309 aa15.07■□□□□ 0
USB1-201ENST00000219281 LIME1Q9H400 295 aa15.07■□□□□ 0
USB1-201ENST00000219281 PLEK2Q9NYT0 353 aa15.07■□□□□ 0
USB1-201ENST00000219281 ZNF581Q9P0T4 197 aa15.07■□□□□ 0
USB1-201ENST00000219281 C19orf25Q9UFG5 118 aaPredicted RBP15.07■□□□□ 0
USB1-201ENST00000219281 AMDHD2Q9Y303 409 aa15.07■□□□□ 0
USB1-201ENST00000219281 NPIPA2E9PIF3 369 aa15.06■□□□□ 0
USB1-201ENST00000219281 NPIPA3F8WFD2 350 aa15.06■□□□□ 0
USB1-201ENST00000219281 OR5H8P0DN80 308 aa15.06■□□□□ 0
USB1-201ENST00000219281 FKBP2P26885 142 aaKnown RBP15.06■□□□□ 0
USB1-201ENST00000219281 F2RL1P55085 397 aa15.06■□□□□ 0
USB1-201ENST00000219281 SP6Q3SY56 376 aa15.06■□□□□ 0
USB1-201ENST00000219281 DEFB123Q8N688 67 aa15.06■□□□□ 0
USB1-201ENST00000219281 SGK3Q96BR1 496 aa15.06■□□□□ 0
USB1-201ENST00000219281 KIRREL1Q96J84 757 aa15.06■□□□□ 0
USB1-201ENST00000219281 AKR1E2Q96JD6 320 aa15.06■□□□□ 0
USB1-201ENST00000219281 COA4Q9NYJ1 87 aa15.06■□□□□ 0
USB1-201ENST00000219281 PATE3B3GLJ2 98 aa15.06■□□□□ 0
USB1-201ENST00000219281 TP53I11O14683 189 aa15.06■□□□□ 0
USB1-201ENST00000219281 DHHO43323 396 aa15.06■□□□□ 0
USB1-201ENST00000219281 SPRY1O43609 319 aaPredicted RBP15.06■□□□□ 0
USB1-201ENST00000219281 GAPDHP04406 335 aaKnown RBP15.06■□□□□ 0
USB1-201ENST00000219281 CD63P08962 238 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms