RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ZNF525Q8N782 197 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 RAB2BQ8WUD1 216 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 TNFAIP8L1Q8WVP5 186 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 FAM168AQ92567 244 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 YIPF5Q969M3 257 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 RFT1Q96AA3 541 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 FOXC2Q99958 501 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 BCL7BQ9BQE9 202 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 PIMREGQ9BSJ6 248 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 FAM192AQ9GZU8 254 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 TREM2Q9NZC2 230 aa11.11□□□□□ -0.63
TIMP1-201ENST00000218388 ASH1LQ9NR48 2969 aaKnown RBP11.11□□□□□ -0.63
TIMP1-201ENST00000218388 NAV2Q8IVL1 2488 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 TRAPPC2LH3BP13 241 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 TMEM178BH3BS89 294 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
TIMP1-201ENST00000218388 SYNGR1O43759 233 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 CYB5R3P00387 301 aaPredicted RBP11.1□□□□□ -0.63
TIMP1-201ENST00000218388 ADRA2CP18825 462 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 RAB3BP20337 219 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 PMELP40967 661 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 TMBIM6P55061 237 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 LSM3P62310 102 aaKnown RBP11.1□□□□□ -0.63
TIMP1-201ENST00000218388 RIN1Q13671 783 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 BLMHQ13867 455 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 KCNJ8Q15842 424 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 Q5PR19 223 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 SHEQ5VZ18 495 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 ZNF826PQ6ZT77 177 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 C11orf53Q8IXP5 236 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 PXT1Q8NFP0 134 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 OR5D18Q8NGL1 313 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 OR51F2Q8NH61 342 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 RAB1CQ92928 201 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 CEP19Q96LK0 163 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 RHOFQ9HBH0 211 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 PLGRKTQ9HBL7 147 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 SMURF1Q9HCE7 757 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 PCDHB16Q9NRJ7 776 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 RASL12Q9NYN1 266 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 AK6Q9Y3D8 172 aaKnown RBP11.1□□□□□ -0.63
TIMP1-201ENST00000218388 CACNG2Q9Y698 323 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 V9GY05 133 aa11.1□□□□□ -0.63
TIMP1-201ENST00000218388 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 SRRM5B3KS81 715 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 PPIAL4DF5H284 164 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 LYNX1G3V0Z9 82 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 NOS1APO75052 506 aaPredicted RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 ZNF780AO75290 641 aaPredicted RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 RHBDL1O75783 438 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 ACAA1P09110 424 aaPredicted RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 PGA5P0DJD9 388 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 LYNX1P0DP58 116 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 GLRA1P23415 457 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 PTGFRP43088 359 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 GPR6P46095 362 aaPredicted RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 BMXP51813 675 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 ZP1P60852 638 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 GPR176Q14439 515 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 CLEC12BQ2HXU8 276 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 SMIM21Q3B7S5 101 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 AWAT2Q6E213 333 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 FIP1L1Q6UN15 594 aaKnown RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 BOLLQ8N9W6 283 aaKnown RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 POC1AQ8NBT0 407 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 OR6M1Q8NGM8 313 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 SLAMF9Q96A28 289 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 METTL9Q9H1A3 318 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 CNTD2Q9H8S5 307 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 ELL3Q9HB65 397 aaPredicted RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 DNAJB11Q9UBS4 358 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 GHRLQ9UBU3 117 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 MRPS28Q9Y2Q9 187 aaKnown RBP11.09□□□□□ -0.63
TIMP1-201ENST00000218388 PPIAL4AQ9Y536 164 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 POLQO75417 2590 aa11.09□□□□□ -0.63
TIMP1-201ENST00000218388 TACC2O95359 2948 aa11.08□□□□□ -0.63
TIMP1-201ENST00000218388 TRAV38-1A0A0B4J264 116 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 ISPDA4D126 451 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 CCDC160A6NGH7 325 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 AKR7A2O43488 359 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 NXPH2O95156 264 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 CDRT1O95170 752 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 FSTL3O95633 263 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 LHBP01229 141 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 UBBP0CG47 229 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 MUC1P15941 1255 aaPredicted RBP11.08□□□□□ -0.64
TIMP1-201ENST00000218388 GIFP27352 417 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 HTR2CP28335 458 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 SDC2P34741 201 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 OR3A4PP47883 348 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 SERPINB10P48595 397 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 CAPZA1P52907 286 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 ART1P52961 327 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 VBP1P61758 197 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 BTG1P62324 171 aa11.08□□□□□ -0.64
TIMP1-201ENST00000218388 RSU1Q15404 277 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms