RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NXT1Q9UKK6 140 aaKnown RBP11.62□□□□□ -0.55
SRP54-201ENST00000216774 LOC102723996A0A087X1L8 192 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 FBXO24O75426 580 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 FARS2O95363 451 aaKnown RBP11.62□□□□□ -0.55
SRP54-201ENST00000216774 OR5H8P0DN80 308 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 NME2P22392 152 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 DTYMKP23919 212 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 FCGR2CP31995 323 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 DSCR4P56555 118 aaPredicted RBP11.62□□□□□ -0.55
SRP54-201ENST00000216774 MRPS34P82930 218 aaKnown RBP11.62□□□□□ -0.55
SRP54-201ENST00000216774 FAM3AP98173 230 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 PCOLCEQ15113 449 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 UBAC2Q8NBM4 344 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 RBM24Q9BX46 236 aaKnown RBP11.62□□□□□ -0.55
SRP54-201ENST00000216774 ANGPTL4Q9BY76 406 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 BIN3Q9NQY0 253 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 NECAP2Q9NVZ3 263 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 PLEK2Q9NYT0 353 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
SRP54-201ENST00000216774 TMEM225BP0DP42 221 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 LIFP15018 202 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 DVL1P1P54792 670 aaPredicted RBP11.61□□□□□ -0.55
SRP54-201ENST00000216774 MTCP1P56278 107 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 TMEM33P57088 247 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 STARD6P59095 220 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 PDZK1IP1Q13113 114 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 FAM76BQ5HYJ3 339 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 AVPI1Q5T686 147 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 FAM27BQ5VT28 67 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 GGNBP1Q5YKI7 109 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 DHRS11Q6UWP2 260 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 MAML2Q8IZL2 1156 aaPredicted RBP11.61□□□□□ -0.55
SRP54-201ENST00000216774 DMBX1Q8NFW5 382 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 SGK3Q96BR1 496 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 ULBP2Q9BZM5 246 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 KCNIP3Q9Y2W7 256 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 AMDHD2Q9Y303 409 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 LY6G6EA0A0G2JKS1 128 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 DBHP09172 617 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 CRYGSP22914 178 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 PAX6P26367 422 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 EPHA8P29322 1005 aaPredicted RBP11.61□□□□□ -0.55
SRP54-201ENST00000216774 RAET1LQ5VY80 246 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 C20orf196Q8IYI0 205 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 GLYATL2Q8WU03 294 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 FBXO17Q96EF6 278 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 GALNT14Q96FL9 552 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 U3KQA8 63 aa11.61□□□□□ -0.55
SRP54-201ENST00000216774 PQLC2LA1A4F0 135 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 FAM157AC9JC47 383 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 RAB35Q15286 201 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 RSU1Q15404 277 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 CNN3Q15417 329 aaKnown RBP11.6□□□□□ -0.55
SRP54-201ENST00000216774 HMGN3Q15651 99 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 SNAI3Q3KNW1 292 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 ZIC4Q8N9L1 334 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 MRPL24Q96A35 216 aaKnown RBP11.6□□□□□ -0.55
SRP54-201ENST00000216774 NTNG2Q96CW9 530 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 UCN2Q96RP3 112 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 SULT4A1Q9BR01 284 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 HDHD3Q9BSH5 251 aaPredicted RBP11.6□□□□□ -0.55
SRP54-201ENST00000216774 ARV1Q9H2C2 271 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 GPR173Q9NS66 373 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 FAM212BQ9NTI7 297 aaPredicted RBP11.6□□□□□ -0.55
SRP54-201ENST00000216774 SPEGQ15772 3267 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 IGHV3-15A0A0B4J1V0 119 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 ZNF98A6NK75 572 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 E5RGE8 158 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 MSTNO14793 375 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 ZIC3O60481 467 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 IGFBP4P22692 258 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 PIGPP57054 158 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 EXT1Q16394 746 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 SWI5Q1ZZU3 235 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 ASCL4Q6XD76 172 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 Q6ZRG5 221 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 COMMD1Q8N668 190 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 KIRREL1Q96J84 757 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 FAAP24Q9BTP7 215 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 NAA60Q9H7X0 242 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 AK3Q9UIJ7 227 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 NSG2Q9Y328 171 aa11.6□□□□□ -0.55
SRP54-201ENST00000216774 NCOA6Q14686 2063 aaPredicted RBP11.59□□□□□ -0.55
SRP54-201ENST00000216774 IGHV1-45A0A0A0MS14 117 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 MEX3AA1L020 520 aaKnown RBP11.59□□□□□ -0.55
SRP54-201ENST00000216774 ZNF728P0DKX0 622 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 ACKR3P25106 362 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 NFYBP25208 207 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 CD80P33681 288 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 PEA15Q15121 130 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 GPR137CQ8N3F9 429 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 GNRHR2Q96P88 292 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 CMSS1Q9BQ75 279 aaKnown RBP11.59□□□□□ -0.55
SRP54-201ENST00000216774 SF3B5Q9BWJ5 86 aaKnown RBP11.59□□□□□ -0.55
SRP54-201ENST00000216774 SUCNR1Q9BXA5 334 aa11.59□□□□□ -0.55
SRP54-201ENST00000216774 ZNF700Q9H0M5 742 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms