RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 C1QTNF9BB2RNN3 333 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 PMS2P2O95744 297 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 C1QTNF9P0C862 333 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 THBS4P35443 961 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 TPBGQ13641 420 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 SLC38A9Q8NBW4 561 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 RELL2Q8NC24 303 aaPredicted RBP12.15□□□□□ -0.46
SIX4-201ENST00000216513 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 ADAM10O14672 748 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 IAH1Q2TAA2 248 aaPredicted RBP12.15□□□□□ -0.46
SIX4-201ENST00000216513 FAM74A1Q5RGS3 127 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 SLA2Q9H6Q3 261 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 SNRPNP63162 240 aaKnown RBP12.15□□□□□ -0.46
SIX4-201ENST00000216513 P2RY6Q15077 328 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.46
SIX4-201ENST00000216513 ST8SIA2Q92186 375 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 TVP23CQ96ET8 276 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 CD80P33681 288 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 AKR1C3P42330 323 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 OPCMLQ14982 345 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 ZNF767PQ75MW2 155 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 ZAR1Q86SH2 424 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 ASB10Q8WXI3 467 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 LRFN5Q96NI6 719 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 ZNF2Q9BSG1 426 aaPredicted RBP12.14□□□□□ -0.47
SIX4-201ENST00000216513 SFXN3Q9BWM7 321 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 PRAF2O60831 178 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 TBPP20226 339 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 TSPO2Q5TGU0 170 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 ADGRG3Q86Y34 549 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 OR52N1Q8NH53 320 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 DDOQ99489 341 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 SBF1O95248 1867 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 RBBP6Q7Z6E9 1792 aaKnown RBP12.14□□□□□ -0.47
SIX4-201ENST00000216513 SSSCA1O60232 199 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 C1QAP02745 245 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 HOXA6P31267 233 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 SSX8Q7RTT4 187 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 TMEM104Q8NE00 496 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 MRGPRDQ8TDS7 321 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 MED30Q96HR3 178 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 H3BP45 60 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 OR5G3P0C626 314 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 BMI1P35226 326 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 RAP2BP61225 183 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 AARDQ4LEZ3 155 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 ANGPTL4Q9BY76 406 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 DVL1O14640 695 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 MRPS14O60783 128 aaKnown RBP12.14□□□□□ -0.47
SIX4-201ENST00000216513 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
SIX4-201ENST00000216513 GFRA1P56159 465 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 EXOSC2Q13868 293 aaKnown RBP12.14□□□□□ -0.47
SIX4-201ENST00000216513 ETFDHQ16134 617 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 SMIM15Q7Z3B0 74 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 PLSCR3Q9NRY6 295 aa12.14□□□□□ -0.47
SIX4-201ENST00000216513 EP300Q09472 2414 aaPredicted RBP12.14□□□□□ -0.47
SIX4-201ENST00000216513 DOC2BQ14184 412 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 MRM1Q6IN84 353 aaKnown RBP12.13□□□□□ -0.47
SIX4-201ENST00000216513 OR13D1Q8NGV5 346 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 KLK11Q9UBX7 282 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 A0A0A6YYJ9 748 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 CHRM2P08172 466 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 PEA15Q15121 130 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 ZFP62Q8NB50 900 aaPredicted RBP12.13□□□□□ -0.47
SIX4-201ENST00000216513 CORO2AQ92828 525 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 ZNF385AQ96PM9 386 aaKnown RBP12.13□□□□□ -0.47
SIX4-201ENST00000216513 TGIF2Q9GZN2 237 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 PPIAL4AQ9Y536 164 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 CDIPTO14735 213 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 RBP4P02753 201 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 MGMTP16455 207 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 IGFBP7Q16270 282 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 OTOSQ8NHW6 89 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 COA4Q9NYJ1 87 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 XRCC3O43542 346 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 TGM6O95932 706 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 PSMB1P20618 241 aaKnown RBP12.13□□□□□ -0.47
SIX4-201ENST00000216513 HAGHQ16775 308 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 SYT6Q5T7P8 510 aaPredicted RBP12.13□□□□□ -0.47
SIX4-201ENST00000216513 EPPINO95925 133 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 NAT2P11245 290 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 DIRC2Q96SL1 478 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 ZNF436Q9C0F3 470 aaPredicted RBP12.13□□□□□ -0.47
SIX4-201ENST00000216513 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 KIF13BQ9NQT8 1826 aa12.13□□□□□ -0.47
SIX4-201ENST00000216513 SULT1C4O75897 302 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 IGLV3-19P01714 112 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 ARG1P05089 322 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 DCTDP32321 178 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 UBE2KP61086 200 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 OR2J1Q9GZK6 312 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 SLC35A2P78381 396 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms