RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CDH26Q8IXH8 852 aa17■□□□□ 0.31
RHBDD3-201ENST00000216085 C11orf53Q8IXP5 236 aa17■□□□□ 0.31
RHBDD3-201ENST00000216085 MUC20Q8N307 709 aaPredicted RBP17■□□□□ 0.31
RHBDD3-201ENST00000216085 BOLLQ8N9W6 283 aaKnown RBP17■□□□□ 0.31
RHBDD3-201ENST00000216085 OR52N4Q8NGI2 321 aa17■□□□□ 0.31
RHBDD3-201ENST00000216085 SPACA5Q96QH8 159 aa17■□□□□ 0.31
RHBDD3-201ENST00000216085 WIPI2Q9Y4P8 454 aa17■□□□□ 0.31
RHBDD3-201ENST00000216085 PPIAL4AQ9Y536 164 aa17■□□□□ 0.31
RHBDD3-201ENST00000216085 PRRC2AP48634 2157 aaKnown RBP16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 IGKV1-27A0A075B6S5 117 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 IGHV4-30-2A0A087WSY4 118 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 FGF9P31371 208 aaPredicted RBP16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 NR4A2P43354 598 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 GDPGP1Q6ZNW5 385 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 SLC25A26Q70HW3 274 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 GPR141Q7Z602 305 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 Q8IYB0 196 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 RFT1Q96AA3 541 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 FOXRED1Q96CU9 486 aaPredicted RBP16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 S100A13Q99584 98 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 FAM192AQ9GZU8 254 aa16.99■□□□□ 0.31
RHBDD3-201ENST00000216085 SRRM5B3KS81 715 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 FSTL3O95633 263 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 GLRA1P23415 457 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 MDH2P40926 338 aaKnown RBP16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 RANBP1P43487 201 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 GLT8D1Q68CQ7 371 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 C22orf42Q6IC83 251 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 KRTAP1-3Q8IUG1 177 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 SPICQ8N5J4 248 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 JAGN1Q8N5M9 183 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 GCSAMQ8N6F7 178 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 ZSCAN4Q8NAM6 433 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 OR13F1Q8NGS4 319 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 CHCHD6Q9BRQ6 235 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 METTL17Q9H7H0 456 aaPredicted RBP16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 DNAJB11Q9UBS4 358 aa16.98■□□□□ 0.31
RHBDD3-201ENST00000216085 TRAV38-1A0A0B4J264 116 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 LOC100506127A0A0U1RQW1 187 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 TRAPPC2LH3BP13 241 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 PDCD5O14737 125 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 AKR7A2O43488 359 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 RHBDL1O75783 438 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 HEXAP06865 529 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 TMEM225BP0DP42 221 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 GADD45AP24522 165 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 PSMD7P51665 324 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 PDZK1IP1Q13113 114 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 SMIM21Q3B7S5 101 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 AVPI1Q5T686 147 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 SAXO1Q8IYX7 474 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 POC1AQ8NBT0 407 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 WFDC11Q8NEX6 87 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 OR5D18Q8NGL1 313 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 OR51F2Q8NH61 342 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 YIPF6Q96EC8 236 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 KCTD7Q96MP8 289 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 OR51E2Q9H255 320 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 TXNL4BQ9NX01 149 aaKnown RBP16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 DCAF16Q9NXF7 216 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 RASL12Q9NYN1 266 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 CREBBPQ92793 2442 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 OOEPA6NGQ2 149 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 LGALS8O00214 317 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 SYNGR1O43759 233 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 NXPH2O95156 264 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 LHBP01229 141 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 ACAA1P09110 424 aaPredicted RBP16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 PGA5P0DJD9 388 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 MICBQ29980 383 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 FIP1L1Q6UN15 594 aaKnown RBP16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 TNFAIP8L1Q8WVP5 186 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 TMIGD2Q96BF3 282 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 CEP19Q96LK0 163 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 GAL3ST1Q99999 423 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 UQCC2Q9BRT2 126 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 RHOFQ9HBH0 211 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 SMURF1Q9HCE7 757 aa16.97■□□□□ 0.31
RHBDD3-201ENST00000216085 TRAV1-2A0A0B4J238 106 aa16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 VWC2LB2RUY7 222 aa16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 AIREO43918 545 aa16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 NOS1APO75052 506 aaPredicted RBP16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 IGHV2-70P01814 119 aa16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 MUC1P15941 1255 aaPredicted RBP16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 RPL5P46777 297 aaKnown RBP16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 TMEM155Q4W5P6 130 aa16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 SLAMF9Q96A28 289 aa16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 C12orf43Q96C57 262 aaKnown RBP16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 PPIL3Q9H2H8 161 aaKnown RBP16.96■□□□□ 0.31
RHBDD3-201ENST00000216085 C3orf80F5H4A9 247 aa16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 SPRY1O43609 319 aaPredicted RBP16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 TFAP2AP05549 437 aa16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 USF1P22415 310 aaPredicted RBP16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 CD80P33681 288 aa16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 GMFBP60983 142 aa16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 ZMYND11Q15326 602 aa16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 ELL3Q9HB65 397 aaPredicted RBP16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 PCDHB16Q9NRJ7 776 aa16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 PCDHB10Q9UN67 800 aa16.95■□□□□ 0.3
RHBDD3-201ENST00000216085 NDUFA2O43678 99 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms