RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 UCN2Q96RP3 112 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 RIF1Q5UIP0 2472 aaKnown RBP16.75■□□□□ 0.27
MBD3-201ENST00000156825 TAAR5O14804 337 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 HIST1H1DP16402 221 aaKnown RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 ZNF239Q16600 458 aaKnown RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 TOX4O94842 621 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 CD37P11049 281 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 CEACAM6P40199 344 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 SELENOPP49908 381 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 RNPS1Q15287 305 aaKnown RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 PTPMT1Q8WUK0 201 aaPredicted RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 NKX6-2Q9C056 277 aaPredicted RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 ARPC4-TTLL3A0A0A6YYG9 625 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 CTAG2O75638 210 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 MICBQ29980 383 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 ZNF787Q6DD87 383 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 PRR27Q6MZM9 219 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 ZNF275Q9NSD4 429 aaPredicted RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 TNFSF14O43557 240 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 TAGLNQ01995 201 aaKnown RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 LFNGQ8NES3 379 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 PTP4A1Q93096 173 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 EXOGQ9Y2C4 368 aaKnown RBP16.74■□□□□ 0.27
MBD3-201ENST00000156825 IGHV5-10-1A0A0J9YXX1 117 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 IGHV4-34P06331 123 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 SLC25A4P12235 298 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 C4orf17Q53FE4 359 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 SPINK9Q5DT21 86 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 CLDN23Q96B33 292 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 FN3KRPQ9HA64 309 aa16.74■□□□□ 0.27
MBD3-201ENST00000156825 OR2C1O95371 312 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 FAM58AQ8N1B3 248 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 ST8SIA2Q92186 375 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 ADGRG7Q96K78 797 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 PLEKHA2Q9HB19 425 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 KPTNQ9Y664 436 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 A0A1B0GTQ1 180 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 GPR31O00270 319 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 ADH4P08319 380 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 ACSM4P0C7M7 580 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 PCMT1P22061 227 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 GAB4Q2WGN9 574 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 PSG11Q9UQ72 335 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 TMEM30CPA0ZSE6 113 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 K7EQM0 130 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 PPP1R1AQ13522 171 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 ST3GAL2Q16842 350 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 TUSC5Q8IXB3 177 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 LYG1Q8N1E2 194 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 ARRDC1Q8N5I2 433 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 UBE2L5PA0A1B0GUS4 154 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 LINC01387J3KSC0 135 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 MASP2O00187 686 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 ALX3O95076 343 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 IL5P05113 134 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 F2RP25116 425 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 PNLIPRP3Q17RR3 467 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 D2HGDHQ8N465 521 aa16.73■□□□□ 0.27
MBD3-201ENST00000156825 COLQQ9Y215 455 aaPredicted RBP16.73■□□□□ 0.27
MBD3-201ENST00000156825 NCOR1O75376 2440 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 TRBV5-3A0A0A0MS03 114 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 A0A1W2PRD5 423 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 A0A1W2PRF3 423 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 A0A1W2PRM7 423 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 PPP1R2P9O14990 202 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 OPN1MWP04001 364 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 OPN1MW2P0DN77 364 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 OPN1MW3P0DN78 364 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 CD300LDQ6UXZ3 194 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 DBX2Q6ZNG2 339 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 ATG4DQ86TL0 474 aaPredicted RBP16.72■□□□□ 0.27
MBD3-201ENST00000156825 ABHD3Q8WU67 409 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 NCBP2LA6PVI3 153 aaKnown RBP16.72■□□□□ 0.27
MBD3-201ENST00000156825 PDGFBP01127 241 aaPredicted RBP16.72■□□□□ 0.27
MBD3-201ENST00000156825 MUC20Q8N307 709 aaPredicted RBP16.72■□□□□ 0.27
MBD3-201ENST00000156825 OR8B12Q8NGG6 310 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 TCEAL7Q9BRU2 100 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 PRR13Q9NZ81 148 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 NDUFB3O43676 98 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 GLDNQ6ZMI3 551 aaPredicted RBP16.72■□□□□ 0.27
MBD3-201ENST00000156825 PPP5D1E7EU14 171 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 GPA33Q99795 319 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 UBR3Q6ZT12 1888 aa16.72■□□□□ 0.27
MBD3-201ENST00000156825 FOXS1O43638 330 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 DHRS2Q13268 280 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 ADGRG3Q86Y34 549 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 CA5BP1Q8WTZ4 195 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 MITD1Q8WV92 249 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 HGDQ93099 445 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 ACTR3CQ9C0K3 210 aaPredicted RBP16.71■□□□□ 0.27
MBD3-201ENST00000156825 ONECUT1Q9UBC0 465 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 MTFP1Q9UDX5 166 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 ZNF638Q14966 1978 aaKnown RBP16.71■□□□□ 0.27
MBD3-201ENST00000156825 ZNHIT1O43257 154 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 FCGR3BO75015 233 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 TNFRSF1AP19438 455 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 TMEM230Q96A57 120 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 SOX7Q9BT81 388 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 ZNF835Q9Y2P0 537 aa16.71■□□□□ 0.27
MBD3-201ENST00000156825 NDUFB6O95139 128 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms