RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CD80P33681 288 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 SNTB1Q13884 538 aaKnown RBP10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ELFN2Q5R3F8 820 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 TUSC5Q8IXB3 177 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 CCDC71LQ8N9Z2 235 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 OR2V1Q8NHB1 315 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 LRRC46Q96FV0 321 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 NARFLQ9H6Q4 476 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 TRGV5A0A0B4J1U4 118 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 SIRPB1O00241 398 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 NXPH2O95156 264 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 IL2RGP31785 369 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 MLF1P58340 268 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 EIF3IQ13347 325 aaKnown RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 AKR1C8PQ5T2L2 129 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 FIP1L1Q6UN15 594 aaKnown RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 FBXW5Q969U6 566 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 FOXB1Q99853 325 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 EMC3Q9P0I2 261 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 KLF13Q9Y2Y9 288 aaPredicted RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 TNRC18O15417 2968 aaPredicted RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 GFRA3O60609 400 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 RPS4Y1P22090 263 aaKnown RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 GALP22466 123 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 FABP6P51161 128 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 GPM6AP51674 278 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 HLXQ14774 488 aaPredicted RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF808Q8N4W9 903 aaPredicted RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 EXD3Q8N9H8 876 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 WDSUB1Q8N9V3 476 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 TERB2Q8NHR7 220 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 RGP1Q92546 391 aaPredicted RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 SEH1LQ96EE3 360 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 SCMH1Q96GD3 660 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 LRFN3Q9BTN0 628 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 KCNIP1Q9NZI2 227 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 RNF150Q9ULK6 438 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 HDGFL3Q9Y3E1 203 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 B4E171 279 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 IGHV3-13P01766 116 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 IGHV3-7P01780 117 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 VSIG10L2P0DP72 767 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 ACP1P24666 158 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 TSPAN7P41732 249 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 PIGPP57054 158 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 AANATQ16613 207 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 MRPL14Q6P1L8 145 aaKnown RBP10.62□□□□□ -0.71
CHPF2-201ENST00000035307 FDCSPQ8NFU4 85 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 C2CD4CQ8TF44 421 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF285Q96NJ3 590 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 SCPEP1Q9HB40 452 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 KCNJ16Q9NPI9 418 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 C1orf123Q9NWV4 160 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 FLVCR1Q9Y5Y0 555 aa10.62□□□□□ -0.71
CHPF2-201ENST00000035307 ZFP36L1Q07352 338 aaKnown RBP10.61□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF529Q6P280 563 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 LYG2Q86SG7 212 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 FBXO7Q9Y3I1 522 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 URGCP-MRPS24S4R325 110 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 CD300LBA8K4G0 201 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 VAMP5O95183 116 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 TGFBR3Q03167 851 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 PLAURQ03405 335 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 CLN3Q13286 438 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 ATPAF1Q5TC12 328 aaPredicted RBP10.61□□□□□ -0.71
CHPF2-201ENST00000035307 SIGIRRQ6IA17 410 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 H3F3CQ6NXT2 135 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 CISD2Q8N5K1 135 aaKnown RBP10.61□□□□□ -0.71
CHPF2-201ENST00000035307 DEFB108BQ8NET1 73 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 EMG1Q92979 244 aaKnown RBP10.61□□□□□ -0.71
CHPF2-201ENST00000035307 KCNJ15Q99712 375 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 FAM173AQ9BQD7 235 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 SULT4A1Q9BR01 284 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 GHITMQ9H3K2 345 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 WDR54Q9H977 334 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 EXOSC3Q9NQT5 275 aaKnown RBP10.61□□□□□ -0.71
CHPF2-201ENST00000035307 CCDC168Q8NDH2 2452 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 EPG5Q9HCE0 2579 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 IFNA2P01563 188 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 OR13C7P0DN81 318 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 VSIG8P0DPA2 414 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 PTGFRP43088 359 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 ARF1P84077 181 aaKnown RBP10.61□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF709Q8N972 641 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 NFAM1Q8NET5 270 aaPredicted RBP10.61□□□□□ -0.71
CHPF2-201ENST00000035307 GPHA2Q96T91 129 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 MGAQ8IWI9 3026 aa10.61□□□□□ -0.71
CHPF2-201ENST00000035307 SNRPGP15A8MWD9 76 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 NPIPB9F8W1W9 429 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 GP1BAP07359 652 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 BMP5P22003 454 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 GCH1P30793 250 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 MRPS34P82930 218 aaKnown RBP10.6□□□□□ -0.71
CHPF2-201ENST00000035307 PAN3Q58A45 887 aaKnown RBP10.6□□□□□ -0.71
CHPF2-201ENST00000035307 ADAD2Q8NCV1 583 aaKnown RBP10.6□□□□□ -0.71
CHPF2-201ENST00000035307 RTN4IP1Q8WWV3 396 aaPredicted RBP10.6□□□□□ -0.71
CHPF2-201ENST00000035307 PPP1R3CQ9UQK1 317 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 TIMM10BQ9Y5J6 103 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms