RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Clvs2Q8BG92 327 aa10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Srsf4Q8VE97 489 aaKnown RBP10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr862Q8VFJ1 306 aa10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tmem38bQ9DAV9 292 aa10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Aph1cQ9DCZ9 258 aa10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Icam4Q9ERM2 262 aa10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fbxo8Q9QZN3 319 aa10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ubl3Q9Z2M6 117 aa10.65□□□□□ -0.71
Pcif1-201ENSMUST00000041643 CntrlA2AL36 2334 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Zfp712E9PXJ4 705 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Prr23a1G3UW32 258 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Il6P08505 211 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 GdnfP48540 211 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Sult4a1P63046 284 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fam187bQ0VAY3 358 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fam25cQ8CF02 89 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Chrm2Q9ERZ4 466 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Cd163l1A0A1B0GSB0 991 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm21797J3QNW5 180 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Vmn1r27K7N688 303 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tesk1O70146 627 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 CenptQ3TJM4 515 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Eif5a2Q8BGY2 153 aaKnown RBP10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Abhd6Q8R2Y0 336 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Glb1l3A2RSQ1 649 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Esp15A8R0U8 85 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr224M9MMJ7 314 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 CcnkO88874 554 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Csn2P10598 231 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fzd8Q61091 685 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 DhhQ61488 396 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr1126Q7TR49 314 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Med19Q8C1S0 244 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Q9CWB7 115 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Med18Q9CZ82 208 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 MtfmtQ9D799 386 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Q9DAN9 164 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gng12Q9DAS9 72 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tmem27Q9ESG4 222 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 St6galnac5Q9QYJ1 336 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm12117V9GXK0 151 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm42421F6X8D5 166 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Hoxd4P10628 250 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Arf1P84078 181 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Slc22a14Q497L9 629 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Prss43Q76HL1 382 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gpr137bQ8BNQ3 385 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ccdc58Q8R3Q6 144 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr578Q8VH17 313 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Hsbp1Q9CQZ1 76 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 MrnipQ9D1F5 335 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr878Q9EQA9 314 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 C1ql3Q9ESN4 255 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Bex3Q9WTZ9 124 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Hey1Q9WV93 299 aa10.64□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Zfp688E9Q5M9 274 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Msl3l2G3X992 371 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm8660K7N6J2 305 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SrcP05480 541 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Nufip2Q5F2E7 692 aaKnown RBP10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tspan7Q62283 249 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Fbxo27Q6DIA9 280 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 P4htmQ8BG58 503 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Zfp52Q8BJ45 724 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 LssQ8BLN5 733 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Plekhn1Q8C886 359 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Alkbh6Q8K2U2 238 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ykt6Q9CQW1 198 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 SrrQ9QZX7 339 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 ChrdQ9Z0E2 948 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 4930433I11RikA0A0U1RPT6 723 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr288E9Q1P2 318 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 9130019O22RikG3X941 543 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Sh2b3O09039 548 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Emg1O35130 244 aaKnown RBP10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Cr2P19070 1025 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 EbpP70245 230 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Slc2a9Q3T9X0 538 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Pif1Q80SX8 650 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Mogat2Q80W94 334 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr919Q8VF78 315 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Glyr1Q922P9 546 aaKnown RBP10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ceacam18Q9D871 376 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Alpk2Q91ZB0 2144 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Igkv12-38A0A0G2JEI7 115 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Rpl23a-ps3A0A140T8M7 156 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Igkv15-103A0A140T8P3 115 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Gm13178B1AVU7 408 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr750E9Q0Z1 331 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Rpl23aP62751 156 aaKnown RBP10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 ScimpQ3UU41 150 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Zfp872Q3UVL3 465 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 1700057G04RikQ3V0U0 232 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 AstlQ6HA09 435 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Rab35Q6PHN9 201 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 ApoolQ78IK4 265 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 IrgcQ8C262 412 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Tmem56Q8CGF5 276 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Olfr736Q8VFT6 312 aa10.63□□□□□ -0.71
Pcif1-201ENSMUST00000041643 Ing5Q9D8Y8 240 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms