RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 KitlgP20826 273 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Bmp8bP55105 399 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Lgals3bpQ07797 577 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 A4gntQ14BT6 341 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Gpr55Q3UJF0 327 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Pld6Q5SWZ9 221 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Clns1aQ61189 236 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 CblcQ80XL1 496 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Arrb1Q8BWG8 418 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Slc25a1Q8JZU2 311 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 PurgQ8R4E6 350 aaKnown RBP14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr995Q8VF74 315 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr922Q8VG50 311 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 MallQ91X49 154 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Edem1Q925U4 652 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Emc6Q9CQW0 110 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Ap1s2Q9DB50 160 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 SigirrQ9JLZ8 409 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Bcl3Q9Z2F6 448 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Tcrg-V5A0A0G2JGV5 113 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Igkv6-25A0A140T8N7 115 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr419E9Q0Y7 313 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr31E9Q3K2 317 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Tcstv3O70518 169 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Adra2cQ01337 458 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Tgoln1Q62313 353 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Tra2aQ6PFR5 281 aaKnown RBP14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Tmem127Q8BGP5 238 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Fndc9Q8BJN4 226 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 GldnQ8BMF8 549 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Cadm4Q8R464 388 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Nudt21Q9CQF3 227 aaKnown RBP14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr1289A0A288CFY5 326 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Ldlrad3A2AR95 345 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Ldlrad1D3YYZ1 218 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Wisp3D3Z5L9 354 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr66F8VQ01 311 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Tcn2O88968 430 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Il6P08505 211 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Rasl12Q08AT1 266 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Scand1Q2M4I6 142 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Sec14l3Q5SQ27 401 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 PmelQ60696 626 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Pafah1b3Q61205 232 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr1283Q7TQY4 305 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Fbxw13Q8BI57 466 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Q8BR90 294 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Abhd6Q8R2Y0 336 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Ddit4lQ8VHZ5 193 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Letmd1Q924L1 360 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Acy1Q99JW2 408 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 PccbQ99MN9 541 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 1700069L16RikQ9D9H5 109 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Cmtm2aQ9DAR1 169 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 9530002B09RikQ9EPV7 135 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 Dnase2bQ9QY48 354 aa14.61□□□□□ -0.07
Shh-201ENSMUST00000002708 F8Q06194 2319 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Mtg2A2AFK4 405 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Rnaset2aC0HKG5 259 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Rnaset2bC0HKG6 259 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Zfp648D3Z0W3 525 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Vmn1r174E9PYW5 313 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr427E9Q7E7 315 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Gm6465F7A7Y6 181 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Gm20403G3UYB0 123 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Gm10428J3QNV7 132 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Gm3033M0QWI0 180 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Gm3532M0QWL4 194 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 GrprP21729 384 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Fabp2P55050 132 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Tas2r107Q7M725 308 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Elfn1Q8C8T7 828 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Vmn1r230Q8R2A2 316 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr593Q8VF28 327 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Dnaja3Q99M87 480 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Nop16Q9CPT5 178 aaKnown RBP14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 SdhbQ9CQA3 282 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Dmrtc1c1Q9D410 238 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Mmp27D3YV89 551 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Zfp988F6VKC7 633 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Gm3633L7N233 213 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Gm9611L7N476 213 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Raet1cO08604 253 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Ptpmt1Q66GT5 193 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Cfap161Q6P8Y0 303 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr1211Q7TR09 311 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Mob3cQ8BJG4 216 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Pttg1Q9CQJ7 199 aa14.6□□□□□ -0.07
Shh-201ENSMUST00000002708 Ggta1l1A2AUQ7 319 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 VwceQ3U515 929 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Taar8cQ5QD05 344 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr9Q60885 312 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr714Q7TRN0 317 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Skida1Q80YR3 822 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Slc25a44Q8BGF9 314 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Fam124bQ8BLQ0 456 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 RhofQ8BYP3 211 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Cd300eQ8K249 196 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr992Q8VGC6 309 aa14.59□□□□□ -0.07
Shh-201ENSMUST00000002708 Q91WE4 72 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms