RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MICBQ29980 383 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 LPCAT3Q6P1A2 487 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 FAHD2BQ6P2I3 314 aaPredicted RBP13.13□□□□□ -0.31
TRIM3-215ENST00000639856 C3P1Q6ZMU1 363 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 SEMA6DQ8NFY4 1073 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 OR5M8Q8NGP6 311 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 FAHD2AQ96GK7 314 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 FXYD6Q9H0Q3 95 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 MCTS1Q9ULC4 181 aaKnown RBP13.13□□□□□ -0.31
TRIM3-215ENST00000639856 NOSIPQ9Y314 301 aaKnown RBP13.13□□□□□ -0.31
TRIM3-215ENST00000639856 NOP16Q9Y3C1 178 aaKnown RBP13.13□□□□□ -0.31
TRIM3-215ENST00000639856 APC2O95996 2303 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 TRGV5A0A0B4J1U4 118 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 OR6C6A6NF89 314 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 FOXI3A8MTJ6 420 aaPredicted RBP13.13□□□□□ -0.31
TRIM3-215ENST00000639856 IL2RAP01589 272 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 PATE4P0C8F1 98 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 CBX5P45973 191 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 HGFACQ04756 655 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 ARFRP1Q13795 201 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 ACTBL2Q562R1 376 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 VAX1Q5SQQ9 334 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 TSPO2Q5TGU0 170 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 PIGTQ969N2 578 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 TMEM45BQ96B21 275 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 S100A13Q99584 98 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 BOD1L1Q8NFC6 3051 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 SPENQ96T58 3664 aaKnown RBP13.12□□□□□ -0.31
TRIM3-215ENST00000639856 C9orf170A2RU37 121 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 RFPL4AA6NLU0 287 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 RFPL4AL1F8VTS6 287 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 ZNHIT1O43257 154 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 MRPL33O75394 65 aaKnown RBP13.12□□□□□ -0.31
TRIM3-215ENST00000639856 ACTL6AO96019 429 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 CD8AP01732 235 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 PPP3CBP16298 524 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 SERPINA2P20848 420 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 ACKR3P25106 362 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 SORDQ00796 357 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 SRSF4Q08170 494 aaKnown RBP13.12□□□□□ -0.31
TRIM3-215ENST00000639856 HLXQ14774 488 aaPredicted RBP13.12□□□□□ -0.31
TRIM3-215ENST00000639856 KRTAP27-1Q3LI81 207 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 HOGA1Q86XE5 327 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 ARRDC1Q8N5I2 433 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 OR2AE1Q8NHA4 323 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 AKR7LQ8NHP1 331 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 FBXW5Q969U6 566 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 REEP6Q96HR9 211 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 TM2D1Q9BX74 207 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 PRRG4Q9BZD6 226 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 GSX2Q9BZM3 304 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 TIMM10BQ9Y5J6 103 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 KLK10O43240 276 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 HLA-GP17693 338 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 HTR5AP47898 357 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 RAB14P61106 215 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 PCBD1P61457 104 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 IL13RA1P78552 427 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 PSG4Q00888 419 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 OR10K1Q8NGX5 313 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 TERB2Q8NHR7 220 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 MITD1Q8WV92 249 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 WDYHV1Q96HA8 205 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 ARL6Q9H0F7 186 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 FN3KRPQ9HA64 309 aa13.12□□□□□ -0.31
TRIM3-215ENST00000639856 DOCK7Q96N67 2140 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 TRAV14DV4A0A0A6YYC5 116 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 LCATP04180 440 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 RPA2P15927 270 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 CPT2P23786 658 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 BLVRBP30043 206 aaPredicted RBP13.11□□□□□ -0.31
TRIM3-215ENST00000639856 NHLRC3Q5JS37 347 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 C9orf135Q5VTT2 229 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 FGFBP3Q8TAT2 258 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 SPSB1Q96BD6 273 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 OR2H1Q9GZK4 316 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 SLC7A10Q9NS82 523 aa13.11□□□□□ -0.31
TRIM3-215ENST00000639856 ANKRD11Q6UB99 2663 aaPredicted RBP13.11□□□□□ -0.31
TRIM3-215ENST00000639856 TUBAL3A6NHL2 446 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 RP2O75695 350 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 CEACAM4O75871 244 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 FGL1Q08830 312 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 ARL6IP1Q15041 203 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 ADAD2Q8NCV1 583 aaKnown RBP13.1□□□□□ -0.31
TRIM3-215ENST00000639856 MARCH1Q8TCQ1 289 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 ST8SIA4Q92187 359 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 PHB2Q99623 299 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 PECRQ9BY49 303 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 WNT5BQ9H1J7 359 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 ELL3Q9HB65 397 aaPredicted RBP13.1□□□□□ -0.31
TRIM3-215ENST00000639856 GPR173Q9NS66 373 aa13.1□□□□□ -0.31
TRIM3-215ENST00000639856 ZNF230Q9UIE0 474 aaPredicted RBP13.1□□□□□ -0.31
TRIM3-215ENST00000639856 ZNF391Q9UJN7 358 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms