RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 HPSE2Q8WWQ2 592 aa12.8□□□□□ -0.36
SCARB2-216ENST00000639300 NTMQ9P121 344 aa12.8□□□□□ -0.36
SCARB2-216ENST00000639300 AK3Q9UIJ7 227 aa12.8□□□□□ -0.36
SCARB2-216ENST00000639300 C17orf51A8MQB3 221 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 ZFP62Q8NB50 900 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 OR5M9Q8NGP3 310 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 OR11L1Q8NGX0 322 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 CHAC2Q8WUX2 184 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 PLEKHA2Q9HB19 425 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 TMEM74BQ9NUR3 256 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 PCDHB10Q9UN67 800 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 CCL3P10147 92 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 AKR1C3P42330 323 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SCAND1P57086 179 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 RAB32Q13637 225 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 RAB35Q15286 201 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 OR2T2Q6IF00 324 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SEZ6L2Q6UXD5 910 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 ADPRHL1Q8NDY3 354 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 OR8U1Q8NH10 309 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 H1FXQ92522 213 aaKnown RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 CHST6Q9GZX3 395 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SF3B6Q9Y3B4 125 aaKnown RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SH2D1BO14796 132 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 CDC14BO60729 498 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 KLF9Q13886 244 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SPINK14Q6IE38 97 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SCMH1Q96GD3 660 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 PCDHGA9Q9Y5G4 932 aaKnown RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 ZNF705GA8MUZ8 300 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 GSTZ1O43708 216 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 MPC2O95563 127 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SULT1A3P0DMM9 295 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 SULT1A4P0DMN0 295 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 MGAT2Q10469 447 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 ADIRFQ15847 76 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 GAB4Q2WGN9 574 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 WDR74Q6RFH5 385 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 H2BFWTQ7Z2G1 175 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 APOBEC3DQ96AK3 386 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-216ENST00000639300 IP6K3Q96PC2 410 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 GNG13Q9P2W3 67 aa12.79□□□□□ -0.36
SCARB2-216ENST00000639300 ENSAO43768 121 aaKnown RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 HOXA1P49639 335 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 RPS4XP62701 263 aaKnown RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 HMGN3Q15651 99 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 CXorf67Q86X51 503 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 FAM219AQ8IW50 185 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 SLC26A10Q8NG04 563 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 OR2Y1Q8NGV0 311 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 MAFAQ8NHW3 353 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 CHD5Q8TDI0 1954 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 GP1BAP07359 652 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 SMIM10L1P0DMW3 83 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ZNF250P15622 560 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 NDUFB7P17568 137 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 IL11P20809 199 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 LGALSLQ3ZCW2 172 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 OR2W3Q7Z3T1 314 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 THNSL2Q86YJ6 484 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 SMIM10Q96HG1 83 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ZNF75AQ96N20 296 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 FAM173AQ9BQD7 235 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 TMEM9BQ9NQ34 198 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ATPIF1Q9UII2 106 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 KPTNQ9Y664 436 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 CTDSPLO15194 276 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 TBX6O95947 436 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ANKRD34CP0C6C1 535 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 CATSPERDQ86XM0 798 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 KIF26BQ2KJY2 2108 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 PDCD11Q14690 1871 aaKnown RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 MED19A0JLT2 244 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 UMAD1C9J7I0 102 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ZNF705DP0CH99 300 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ZNF705BP0CI00 300 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 FPR2P25090 351 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ARSJQ5FYB0 599 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 PRAMEF5Q5TYX0 476 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 PRAMEF6Q5VXH4 476 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 RPUSD3Q6P087 351 aaKnown RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 ZNF768Q9H5H4 540 aaKnown RBP12.78□□□□□ -0.36
SCARB2-216ENST00000639300 NEUROG3Q9Y4Z2 214 aa12.78□□□□□ -0.36
SCARB2-216ENST00000639300 A8MXE2 369 aa12.77□□□□□ -0.36
SCARB2-216ENST00000639300 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.36
SCARB2-216ENST00000639300 LIMK1P53667 647 aa12.77□□□□□ -0.36
SCARB2-216ENST00000639300 TRA2AQ13595 282 aaKnown RBP eCLIP12.77□□□□□ -0.36
SCARB2-216ENST00000639300 CD200R1LQ6Q8B3 271 aa12.77□□□□□ -0.36
SCARB2-216ENST00000639300 OR1J1Q8NGS3 322 aa12.77□□□□□ -0.36
SCARB2-216ENST00000639300 SARAFQ96BY9 339 aa12.77□□□□□ -0.36
SCARB2-216ENST00000639300 ADAT3Q96EY9 351 aaPredicted RBP12.77□□□□□ -0.36
SCARB2-216ENST00000639300 PRRX2Q99811 253 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms