RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 GVQW1Q8N7I0 195 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 OR2V1Q8NHB1 315 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 PROCRQ9UNN8 238 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 COL16A1Q07092 1604 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-213ENST00000638680 RER1O15258 196 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 CXCL3P19876 107 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 PRICKLE4Q2TBC4 344 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 UBALD1Q8TB05 177 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 ATP23Q9Y6H3 246 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 CBR3O75828 277 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 DUS4LO95620 317 aaKnown RBP16.53■□□□□ 0.24
SCARB2-213ENST00000638680 PNPP00491 289 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 SCAND1P57086 179 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 HSD17B13Q7Z5P4 300 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-213ENST00000638680 C9orf62Q8N4C0 152 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 VN1R1Q9GZP7 353 aa16.53■□□□□ 0.24
SCARB2-213ENST00000638680 GP1BAP07359 652 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 OR4C5Q8NGB2 326 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 ACY3Q96HD9 319 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 NDFIP1Q9BT67 221 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 MIXL1Q9H2W2 232 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 CNTD2Q9H8S5 307 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 FBXL17Q9UF56 701 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 TIMM9Q9Y5J7 89 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 C3orf85A0A1B0GTC6 90 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 J3QR89 54 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 PRDX4Q13162 271 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 ALKBH6Q3KRA9 238 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 LSMEM1Q8N8F7 131 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 M1APQ8TC57 530 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 SPACA9Q96E40 222 aaPredicted RBP16.52■□□□□ 0.24
SCARB2-213ENST00000638680 RASL12Q9NYN1 266 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 YTHDF2Q9Y5A9 579 aaKnown RBP16.52■□□□□ 0.24
SCARB2-213ENST00000638680 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 GLB1P16278 677 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 DSCR4P56555 118 aaPredicted RBP16.52■□□□□ 0.24
SCARB2-213ENST00000638680 FUT7Q11130 342 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 TMEM241Q24JQ0 296 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 ETFBKMTQ8IXQ9 262 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 LINC01555Q8NAE3 123 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 CPEB3Q8NE35 698 aaKnown RBP16.52■□□□□ 0.24
SCARB2-213ENST00000638680 OR10V1Q8NGI7 309 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 UQCC1Q9NVA1 299 aa16.52■□□□□ 0.24
SCARB2-213ENST00000638680 PMS2P1A4D2B8 440 aa16.52■□□□□ 0.23
SCARB2-213ENST00000638680 MYF5P13349 255 aa16.52■□□□□ 0.23
SCARB2-213ENST00000638680 HIST1H3AP68431 136 aa16.52■□□□□ 0.23
SCARB2-213ENST00000638680 ESRP2Q9H6T0 727 aaKnown RBP16.52■□□□□ 0.23
SCARB2-213ENST00000638680 GTF2H5Q6ZYL4 71 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 APOBEC3DQ96AK3 386 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-213ENST00000638680 WDR34Q96EX3 536 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 PPIL1Q9Y3C6 166 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 LOC102723971A0A1B0GUV8 181 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 GSTZ1O43708 216 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-213ENST00000638680 PGA3P0DJD8 388 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 BVESQ8NE79 360 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 FAM210BQ96KR6 192 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 FOXQ1Q9C009 403 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 NUP205Q92621 2012 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 HPP00738 406 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 NAA60Q9H7X0 242 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 CRYAAP02489 173 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 SLC38A11Q08AI6 406 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 ETFDHQ16134 617 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 SMIM21Q3B7S5 101 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 EID2BQ96D98 161 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 NOL4LQ96MY1 436 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-213ENST00000638680 TMEM240Q5SV17 173 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 PRSS41Q7RTY9 318 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 SIRT3Q9NTG7 399 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-213ENST00000638680 SDK1Q7Z5N4 2213 aa16.51■□□□□ 0.23
SCARB2-213ENST00000638680 DHRS3O75911 302 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 TIAL1Q01085 375 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 DMKNQ6E0U4 476 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 OR11H7Q8NGC8 314 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 LRFN3Q9BTN0 628 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 LSM2Q9Y333 95 aaKnown RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 ITGB4P16144 1822 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 CXorf51AA0A1B0GTR3 108 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 MAP1LC3B2A6NCE7 125 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 SPINK4O60575 86 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 OR5AC1P0C628 307 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 HOXB3P14651 431 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 LRRC61Q9BV99 259 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 MAP1LC3BQ9GZQ8 125 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 ZNF275Q9NSD4 429 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 TMEM30CPA0ZSE6 113 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 CTSVO60911 334 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 ZNF737O75373 536 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 PTBP3O95758 552 aaKnown RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 USF1P22415 310 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 PMS2P11Q13670 270 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 INPP5JQ15735 1006 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 LIMS2Q7Z4I7 341 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 KMT5CQ86Y97 462 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 ZNF683Q8IZ20 524 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 CACFD1Q9UGQ2 172 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 URB1O60287 2271 aaKnown RBP16.5■□□□□ 0.23
SCARB2-213ENST00000638680 CTDSPLO15194 276 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 CYC1P08574 325 aa16.5■□□□□ 0.23
SCARB2-213ENST00000638680 ZNF250P15622 560 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms