RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 NLKQ9UBE8 527 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 SLC22A13Q9Y226 551 aa13.85□□□□□ -0.19
CACNA1A-259ENST00000638114 TFF1P04155 84 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 ALPLP05186 524 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 RNASE1P07998 156 aaKnown RBP13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 TGM4P49221 684 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 BPIFB3P59826 476 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 PDCD1Q15116 288 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 SLC9A3R2Q15599 337 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 AWAT1Q58HT5 328 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 CLVS2Q5SYC1 327 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 HAGHLQ6PII5 290 aaPredicted RBP13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 ZNF671Q8TAW3 534 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 GATAD2BQ8WXI9 593 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 AQP3Q92482 292 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 H1FXQ92522 213 aaKnown RBP13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 LHX4Q969G2 390 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 GAFA1Q96PS6 74 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 GPR173Q9NS66 373 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 V9GYS6 101 aa13.84□□□□□ -0.19
CACNA1A-259ENST00000638114 CENPVL3A0A0U1RRI6 287 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 A0A1B0GTI1 187 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 A6NIN4 97 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 METTL15A6NJ78 407 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 OR2AT4A6NND4 320 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 GPR37O15354 613 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 GABRA2P47869 451 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 IL13RA1P78552 427 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 TMED1Q13445 227 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 ODF4Q2M2E3 257 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 ZIK1Q3SY52 487 aaPredicted RBP13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 CDONQ4KMG0 1287 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 ZNF788Q6ZQV5 615 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 OR14K1Q8NGZ2 314 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 ANGPTL6Q8NI99 470 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 UBE2FQ969M7 185 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 TMIGD2Q96BF3 282 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 MED30Q96HR3 178 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 USE1Q9NZ43 259 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 SLC25A10Q9UBX3 287 aaPredicted RBP13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 KPTNQ9Y664 436 aa13.83□□□□□ -0.2
CACNA1A-259ENST00000638114 A0A1B0GVI7 797 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 H3BSH0 61 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 CLDN34H7C241 214 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 DLGAP1O14490 977 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 SIGLEC5O15389 551 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 HOXA3O43365 443 aaPredicted RBP13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 HKR1P10072 659 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 HAAOP46952 286 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 ALDH3A2P51648 485 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 FOXL1Q12952 345 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 DGUOKQ16854 277 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 TMEM42Q69YG0 159 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 FAM220AQ7Z4H9 259 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 VMO1Q7Z5L0 202 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 CATSPERDQ86XM0 798 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 PDZD9Q8IXQ8 264 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 CMTM4Q8IZR5 234 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 LY6G5BQ8NDX9 201 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 TRUB1Q8WWH5 349 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 HRASLS5Q96KN8 279 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 DCTN5Q9BTE1 182 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 PLEKHA1Q9HB21 404 aa13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.82□□□□□ -0.2
CACNA1A-259ENST00000638114 IGKV1D-17A0A075B6S4 117 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 IGHV1-69DA0A0B4J2H0 117 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 DHRS7CA6NNS2 312 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 EBAG9O00559 213 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 SULT1C4O75897 302 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 IGHV1-69P01742 117 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 ACAA1P09110 424 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 PSG2P11465 335 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 NDUFB7P17568 137 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 ZNF573Q86YE8 665 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 C10orf67Q8IYJ2 551 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 CBR4Q8N4T8 237 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 RORBQ92753 470 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 ZNF488Q96MN9 340 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 ADI1Q9BV57 179 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 TNFRSF19Q9NS68 423 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 ACOXLQ9NUZ1 547 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 GNG8Q9UK08 70 aa13.81□□□□□ -0.2
CACNA1A-259ENST00000638114 PQLC2LA1A4F0 135 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 J3QT63 122 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 SYT7O43581 403 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 SYNGR1O43759 233 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 ENTPD6O75354 484 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 CCL1P22362 96 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 ZNF85Q03923 595 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 SMIM21Q3B7S5 101 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 TP53I3Q53FA7 332 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 Q6ZSR3 168 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 KIR3DL3Q8N743 410 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 POC1AQ8NBT0 407 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 ZNRF1Q8ND25 227 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 TMEM185AQ8NFB2 350 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 RNFT2Q96EX2 444 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 DMRTB1Q96MA1 342 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 PRDM13Q9H4Q3 707 aa13.8□□□□□ -0.2
CACNA1A-259ENST00000638114 ELL3Q9HB65 397 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms