RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 MS4A18Q3C1V0 323 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 MRGPRGQ86SM5 289 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
UBE3A-227ENST00000638011 M0R135 149 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 RPL30P62888 115 aaKnown RBP13.67□□□□□ -0.22
UBE3A-227ENST00000638011 C18orf21Q32NC0 220 aaPredicted RBP13.67□□□□□ -0.22
UBE3A-227ENST00000638011 XKR7Q5GH72 579 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 C9orf152Q5JTZ5 239 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 OR5M10Q6IEU7 315 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 PDPNQ86YL7 162 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 OR52B4Q8NGK2 314 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 ZNF799Q96GE5 643 aa13.67□□□□□ -0.22
UBE3A-227ENST00000638011 ZC3HAV1LQ96H79 300 aaKnown RBP13.67□□□□□ -0.22
UBE3A-227ENST00000638011 PPP2CBP62714 309 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 TAZQ16635 292 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 PWWP2BQ6NUJ5 590 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 JMJD6Q6NYC1 403 aaPredicted RBP13.66□□□□□ -0.22
UBE3A-227ENST00000638011 SLC48A1Q6P1K1 146 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 PRSS54Q6PEW0 395 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 DUSP18Q8NEJ0 188 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 WDR34Q96EX3 536 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 CGGBP1Q9UFW8 167 aaPredicted RBP13.66□□□□□ -0.22
UBE3A-227ENST00000638011 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 CBR3O75828 277 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 CALHM2Q9HA72 323 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 DCTDP32321 178 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 OR52E1Q8NGJ3 308 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 SCN10AQ9Y5Y9 1956 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 ABOP16442 354 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 HOXC5Q00444 222 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 NTNG1Q9Y2I2 539 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 HCRTR1O43613 425 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 GLIPR2Q9H4G4 154 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 PEF1Q9UBV8 284 aaKnown RBP13.66□□□□□ -0.22
UBE3A-227ENST00000638011 RCL1Q9Y2P8 373 aaKnown RBP13.66□□□□□ -0.22
UBE3A-227ENST00000638011 C11orf94C9JXX5 98 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 CER1O95813 267 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 GNB1P62873 340 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 TMEM178AQ8NBL3 297 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 OR5M1Q8NGP8 315 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 MS4A8Q9BY19 250 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 MTFP1Q9UDX5 166 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 SMUG1Q53HV7 270 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 ST3GAL6Q9Y274 331 aa13.66□□□□□ -0.22
UBE3A-227ENST00000638011 MFSD2BA6NFX1 497 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 SLC38A11Q08AI6 406 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 TMEM230Q96A57 120 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 CLDN23Q96B33 292 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 MAGT1Q9H0U3 335 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 ZDHHC23Q8IYP9 409 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 CDX2Q99626 313 aaPredicted RBP13.65□□□□□ -0.22
UBE3A-227ENST00000638011 NPY1RP25929 384 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 LINC00303Q3SY05 128 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 OSR2Q8N2R0 312 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 PTP4A1Q93096 173 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 PARP11Q9NR21 331 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 CLN3Q13286 438 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 PIANPQ8IYJ0 282 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 IP6K3Q96PC2 410 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 TGIF2-C20orf24A0A0A6YYL0 155 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 CLEC2LP0C7M8 214 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 ACAA2P42765 397 aaKnown RBP13.65□□□□□ -0.22
UBE3A-227ENST00000638011 TEX30Q5JUR7 227 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 Q6ZPB1 254 aaPredicted RBP13.65□□□□□ -0.22
UBE3A-227ENST00000638011 SLAMF6Q96DU3 332 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 GRAMD2BQ96HH9 432 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 SLC7A10Q9NS82 523 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 PRSS38A1L453 326 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 AESQ08117 197 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 NKAIN1Q4KMZ8 207 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 SLC35E3Q7Z769 313 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 OR1N2Q8NGR9 330 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 SNED1Q8TER0 1413 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 APCSP02743 223 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 DCDP81605 110 aaKnown RBP13.65□□□□□ -0.22
UBE3A-227ENST00000638011 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
UBE3A-227ENST00000638011 ANKRD55Q3KP44 614 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 DLEU7Q6UYE1 221 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 GPR84Q9NQS5 396 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 NAGKQ9UJ70 344 aa13.65□□□□□ -0.22
UBE3A-227ENST00000638011 CTDSPLO15194 276 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 NDUFB7P17568 137 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 POLR2IP36954 125 aaKnown RBP13.64□□□□□ -0.23
UBE3A-227ENST00000638011 TNFRSF4P43489 277 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 C1QTNF12Q5T7M4 302 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-227ENST00000638011 TXNIPQ9H3M7 391 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 DLEC1Q9Y238 1755 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 ACP1P24666 158 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 IRS1P35568 1242 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 C21orf58P58505 322 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 SHBQ15464 509 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 SLC35E4Q6ICL7 350 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 LINC00346Q8IVM7 164 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 TRGV10A0A0A0MS01 117 aa13.64□□□□□ -0.23
UBE3A-227ENST00000638011 TRBV9A0A0B4J1U6 114 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms