RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 DNTTIP1Q9H147 329 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 ZMAT3Q9HA38 289 aaKnown RBP11.43□□□□□ -0.58
PNKP-228ENST00000637325 S100A14Q9HCY8 104 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 GPR173Q9NS66 373 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 NLKQ9UBE8 527 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 DUX4Q9UBX2 424 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 RPUSD1Q9UJJ7 312 aaKnown RBP11.43□□□□□ -0.58
PNKP-228ENST00000637325 SLC22A13Q9Y226 551 aa11.43□□□□□ -0.58
PNKP-228ENST00000637325 A0A1B0GTI1 187 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 A6NIN4 97 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 OR2AT4A6NND4 320 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 H3BSH0 61 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 GPR37O15354 613 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 ENTPD6O75354 484 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 RHBDL1O75783 438 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 TGM4P49221 684 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 PDCD1Q15116 288 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 MEDAGQ5VYS4 303 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 CATSPERDQ86XM0 798 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 FGFRL1Q8N441 504 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 OR14K1Q8NGZ2 314 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 H1FXQ92522 213 aaKnown RBP11.42□□□□□ -0.58
PNKP-228ENST00000637325 SLC25A28Q96A46 364 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 RNFT2Q96EX2 444 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 TBX15Q96SF7 602 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 PLEKHA1Q9HB21 404 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 ONECUT1Q9UBC0 465 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 GNG8Q9UK08 70 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 GMPPBQ9Y5P6 360 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 SOX21Q9Y651 276 aaPredicted RBP11.42□□□□□ -0.58
PNKP-228ENST00000637325 V9GYS6 101 aa11.42□□□□□ -0.58
PNKP-228ENST00000637325 DHRS7CA6NNS2 312 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 DLGAP1O14490 977 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 SYT7O43581 403 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 FCN3O75636 299 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 BAG2O95816 211 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 NDUFB7P17568 137 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 HAAOP46952 286 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 SNRPGP62308 76 aaKnown RBP11.41□□□□□ -0.58
PNKP-228ENST00000637325 ACTC1P68032 377 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 ACTA1P68133 377 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 IL13RA1P78552 427 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 TP53I3Q53FA7 332 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 RUSC1-AS1Q66K80 236 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 ZNF788Q6ZQV5 615 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 ZNF573Q86YE8 665 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 CMTM4Q8IZR5 234 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 C3orf56Q8N813 242 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 ANGPTL6Q8NI99 470 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 GATAD2BQ8WXI9 593 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 AQP3Q92482 292 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 RORBQ92753 470 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 LHX4Q969G2 390 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 GAFA1Q96PS6 74 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 SIRPDQ9H106 197 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 RASL12Q9NYN1 266 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 SLC25A10Q9UBX3 287 aaPredicted RBP11.41□□□□□ -0.58
PNKP-228ENST00000637325 SLC7A11Q9UPY5 501 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 POLDIP2Q9Y2S7 368 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 KPTNQ9Y664 436 aa11.41□□□□□ -0.58
PNKP-228ENST00000637325 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 CENPVL3A0A0U1RRI6 287 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 MDFIC2A0A1B0GVS7 189 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 DAPL1A0PJW8 107 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 TFF1P04155 84 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 ACAA1P09110 424 aaPredicted RBP11.4□□□□□ -0.58
PNKP-228ENST00000637325 PSG2P11465 335 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 SELLP14151 372 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 MMP9P14780 707 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 AMY2BP19961 511 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 CAPZA1P52907 286 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 ZNF85Q03923 595 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 SLC9A3R2Q15599 337 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 OCLNQ16625 522 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 DGUOKQ16854 277 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 TUSC1Q2TAM9 212 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 DEFB112Q30KQ8 113 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 SMIM21Q3B7S5 101 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 CDONQ4KMG0 1287 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 SLC25A30Q5SVS4 291 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 TMEM42Q69YG0 159 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 ZBTB49Q6ZSB9 765 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 CCDC54Q8NEL0 328 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 DCTN5Q9BTE1 182 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 PCDHGB1Q9Y5G3 927 aa11.4□□□□□ -0.58
PNKP-228ENST00000637325 IGHV1-69DA0A0B4J2H0 117 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 FAM230AA0A1W2PPH8 454 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 A0A1W2PQ09 198 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 PQLC2LA1A4F0 135 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 ANKRD61A6NGH8 418 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 J3QT63 122 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 SIGLEC5O15389 551 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 MPZL2O60487 215 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 GATBO75879 557 aaKnown RBP11.39□□□□□ -0.59
PNKP-228ENST00000637325 SERPINA3P01011 423 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 IGHV1-69P01742 117 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 CCL1P22362 96 aa11.39□□□□□ -0.59
PNKP-228ENST00000637325 CFPP27918 469 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms