RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ALKAL2Q6UX46 152 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 C1QL2Q7Z5L3 287 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 LHFPL1Q86WI0 220 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 ADAD2Q8NCV1 583 aaKnown RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 LRRC20Q8TCA0 184 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 MRPS24Q96EL2 167 aaKnown RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 ALKBH3Q96Q83 286 aaPredicted RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 LINC00470Q9BZP3 86 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 NMES1Q9C002 83 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 RAB18Q9NP72 206 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 GPR173Q9NS66 373 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 NUP50Q9UKX7 468 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 HSF4Q9ULV5 492 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 C9orf172C9J069 976 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 DLL1O00548 723 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 SYNGR4O95473 234 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 M6PRP20645 277 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 ATP1B3P54709 279 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 PSG4Q00888 419 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 FOXO1Q12778 655 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 RGS7BPQ6MZT1 257 aaPredicted RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 CRIP3Q6Q6R5 217 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 OR2M7Q8NG81 312 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 OR5M9Q8NGP3 310 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 EMG1Q92979 244 aaKnown RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 PHYHIPLQ96FC7 376 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 POM121Q96HA1 1249 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 Q96M66 194 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 EHFQ9NZC4 300 aa10.58□□□□□ -0.72
CLN8-212ENST00000637083 ZNF230Q9UIE0 474 aaPredicted RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 C14orf166Q9Y224 244 aaKnown RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 NOSIPQ9Y314 301 aaKnown RBP10.58□□□□□ -0.72
CLN8-212ENST00000637083 KIAA1549Q9HCM3 1950 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 LNP1A1A4G5 178 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 CCSO14618 274 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 RRP8O43159 456 aaKnown RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 BCL2L11O43521 198 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 HTR3BO95264 441 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 NRASP01111 189 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 NMBP08949 121 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 AVPR2P30518 371 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 FUT6P51993 359 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 CDCP2Q5VXM1 449 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 ZNF660Q6AZW8 331 aaPredicted RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 OR10K1Q8NGX5 313 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 ST8SIA2Q92186 375 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 SEC22AQ96IW7 307 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 VRK1Q99986 396 aaPredicted RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 OSGIN2Q9Y236 505 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 COL27A1Q8IZC6 1860 aaPredicted RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 FAM230AA0A1W2PPH8 454 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 FIGNL2A6NMB9 653 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 EEF1E1-BLOC1S5C9J1V9 151 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 SPDEFO95238 335 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 MT-CO3P00414 261 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 PSMB6P28072 239 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 NUP62P37198 522 aaPredicted RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 NPY4RP50391 375 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 ARPC4P59998 168 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 TMEM42Q69YG0 159 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 SPINK14Q6IE38 97 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 ASCL4Q6XD76 172 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 OVCH2Q7RTZ1 564 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 OR2AE1Q8NHA4 323 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 AKR7LQ8NHP1 331 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 PCNPQ8WW12 178 aaKnown RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 DHRS9Q9BPW9 319 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 WNT5BQ9H1J7 359 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 C5orf66Q9H5L9 145 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 CHMP1AQ9HD42 196 aaPredicted RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 SDHAF2Q9NX18 166 aa10.57□□□□□ -0.72
CLN8-212ENST00000637083 MCTS1Q9ULC4 181 aaKnown RBP10.57□□□□□ -0.72
CLN8-212ENST00000637083 C13orf42A0A1B0GVH6 325 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 PINLYPA6NC86 204 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 KRBOX1C9JBD0 128 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 CRHP06850 196 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 GABRR1P24046 479 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 ACKR3P25106 362 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 NTF4P34130 210 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 BAMBIQ13145 260 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 AIMP2Q13155 320 aaKnown RBP10.56□□□□□ -0.72
CLN8-212ENST00000637083 LRRC37A5PQ49AS3 106 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 SKA3Q8IX90 412 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 PXT1Q8NFP0 134 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 OR13G1Q8NGZ3 307 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 SUN5Q8TC36 379 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 PRDM14Q9GZV8 571 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 ZNF703Q9H7S9 590 aaPredicted RBP10.56□□□□□ -0.72
CLN8-212ENST00000637083 RNF122Q9H9V4 155 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 FN3KRPQ9HA64 309 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 ZNF701Q9NV72 531 aaPredicted RBP10.56□□□□□ -0.72
CLN8-212ENST00000637083 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 MEMO1Q9Y316 297 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 CNTRLQ7Z7A1 2325 aa10.56□□□□□ -0.72
CLN8-212ENST00000637083 AHCTF1Q8WYP5 2266 aa10.55□□□□□ -0.72
CLN8-212ENST00000637083 ZNF816-ZNF321PA0A0X1KG74 233 aa10.55□□□□□ -0.72
CLN8-212ENST00000637083 MFSD2BA6NFX1 497 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms